Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_A22
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   2.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.8  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   3.7  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   6.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.5  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 439 LNNDQMKELVEGLVLNEVDYYTHFLTGYSRSPDSLREIAKIIKQLREKN 585
           L N ++ E +   + N +   T     + + PD LRE+ K I  LR  N
Sbjct: 353 LRNTELVERMHNKLRNALQ--TVLAQNHPQHPDILRELLKKIPDLRTLN 399


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +1

Query: 367 FEVDSINT--VQFSTHTAYKHIKGYVLNN--DQMKELVEGLVLNEVD 495
           + VD+ NT  +  +   ++  +  + LN+  D+M +  E L L EVD
Sbjct: 203 YMVDNKNTLIIYQNADDSFHRLSSHTLNHNSDKMSDQQENLTLKEVD 249


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 400 STHTAYKHIKGYVLNNDQMKE 462
           ST  + KHIK +V+N D + E
Sbjct: 395 STTISQKHIKVFVVNKDILHE 415


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 535 LAILSNRSGNVYNSQPHSVPG 473
           LA+L+  +G + ++ PH  PG
Sbjct: 9   LALLTLAAGEIAHNDPHFAPG 29


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 601 VCDPVMGDN---GKMYVPEEILPVYRDVLVPLADILTPKPIRSR 723
           V DPV   +   G ++V   I+PV+  V    A +LT K +R R
Sbjct: 55  VHDPVTNSDTYIGFLFVLGLIVPVFTIVSSYAAIVLTLKKVRKR 98


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 599 MSVTR*WVIMEKCTYPKRFCRYTA 670
           +S+ R W I +  TYP +  R  A
Sbjct: 140 ISLDRYWAITDPFTYPSKMSRRRA 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,907
Number of Sequences: 438
Number of extensions: 5177
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)