Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_A20
         (914 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110616-1|AAI10617.1|  679|Homo sapiens asteroid homolog 1 (Dro...    31   5.8  
BC103709-1|AAI03710.1|  540|Homo sapiens ASTE1 protein protein.        31   5.8  
AK027806-1|BAB55383.1|  626|Homo sapiens protein ( Homo sapiens ...    31   5.8  

>BC110616-1|AAI10617.1|  679|Homo sapiens asteroid homolog 1
           (Drosophila) protein.
          Length = 679

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 178 QISQIK--HFFHCILVVVCPNSSNVSYHVWIQLTLXKGRSAAAVPTI*ILRNSL 23
           Q SQ+K   FF C    VCP++ N+    W+ + L KG+ +  +    +LR ++
Sbjct: 300 QQSQVKLQDFFQCG-TYVCPDALNLGLPEWVLVALAKGQLSPFISDALVLRRTI 352


>BC103709-1|AAI03710.1|  540|Homo sapiens ASTE1 protein protein.
          Length = 540

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 178 QISQIK--HFFHCILVVVCPNSSNVSYHVWIQLTLXKGRSAAAVPTI*ILRNSL 23
           Q SQ+K   FF C    VCP++ N+    W+ + L KG+ +  +    +LR ++
Sbjct: 161 QQSQVKLQDFFQCG-TYVCPDALNLGLPEWVLVALAKGQLSPFISDALVLRRTI 213


>AK027806-1|BAB55383.1|  626|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14900 fis, clone PLACE1005176, highly similar to
           Homo sapiens hypothalamus protein HT001 mRNA. ).
          Length = 626

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 178 QISQIK--HFFHCILVVVCPNSSNVSYHVWIQLTLXKGRSAAAVPTI*ILRNSL 23
           Q SQ+K   FF C    VCP++ N+    W+ + L KG+ +  +    +LR ++
Sbjct: 300 QQSQVKLQDFFQCG-TYVCPDALNLGLPEWVLVALAKGQLSPFISDALVLRRTI 352


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,009,182
Number of Sequences: 237096
Number of extensions: 2370632
Number of successful extensions: 5824
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5824
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)