Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_A18
         (916 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.9  
AY058719-1|AAL13948.1|  316|Drosophila melanogaster LD46256p pro...    29   8.9  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.9  
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA...    29   8.9  
AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA ...    29   8.9  

>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 379 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 474
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AY058719-1|AAL13948.1|  316|Drosophila melanogaster LD46256p
           protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 703 PPWNPPSCALLXRPXRLPDTCPPXSLREAWRFLIAH 810
           PP++P   A+L +  RLP   PP  LR    F+ AH
Sbjct: 84  PPFDPKHFAMLMKTGRLPQ-IPPGFLRHRPPFIPAH 118


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 379 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 474
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
            protein.
          Length = 3111

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 612  RLRPPXRASQKSTLKSDVAKPDR--TIKIPGVSPLESPLVRSP 734
            R R P R +  +  KS    P R  TIK P  SP   P+++SP
Sbjct: 2231 RSRSPGRKALAT--KSPYTSPSRKATIKTPHTSPTRKPIIKSP 2271


>AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA
            protein.
          Length = 1929

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 703  PPWNPPSCALLXRPXRLPDTCPPXSLREAWRFLIAH 810
            PP++P   A+L +  RLP   PP  LR    F+ AH
Sbjct: 1697 PPFDPKHFAMLMKTGRLPQ-IPPGFLRHRPPFIPAH 1731


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,903,630
Number of Sequences: 53049
Number of extensions: 517641
Number of successful extensions: 1138
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)