Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_A09
(901 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 242 1e-63
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 241 2e-63
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 241 2e-63
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 241 2e-63
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 241 2e-63
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 241 2e-63
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 239 7e-63
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 165 3e-40
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 116 2e-25
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 93 9e-19
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 242 bits (592), Expect = 1e-63
Identities = 114/204 (55%), Positives = 144/204 (70%), Gaps = 1/204 (0%)
Frame = +3
Query: 243 VQDKNKYNTPKYRLXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 422
+QDKNKYNTPKYR+ VR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 423 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 602
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 603 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKSMLKYTGLTSXGLHVAEYMRSLEQDDED 782
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+ + G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDED 217
Query: 783 SFXRQFSXXL-NXESLXML*XIYR 851
++ +QFS + N + M+ +Y+
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYK 241
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 238
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 241 bits (591), Expect = 2e-63
Identities = 114/204 (55%), Positives = 144/204 (70%), Gaps = 1/204 (0%)
Frame = +3
Query: 243 VQDKNKYNTPKYRLXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 422
+QDKNKYNTPKYR+ VR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 423 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 602
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 603 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKSMLKYTGLTSXGLHVAEYMRSLEQDDED 782
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+ + G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 783 SFXRQFSXXL-NXESLXML*XIYR 851
++ +QFS + N + M+ +Y+
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYK 241
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 238
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 241 bits (591), Expect = 2e-63
Identities = 114/204 (55%), Positives = 144/204 (70%), Gaps = 1/204 (0%)
Frame = +3
Query: 243 VQDKNKYNTPKYRLXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 422
+QDKNKYNTPKYR+ VR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 423 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 602
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 603 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKSMLKYTGLTSXGLHVAEYMRSLEQDDED 782
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+ + G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 783 SFXRQFSXXL-NXESLXML*XIYR 851
++ +QFS + N + M+ +Y+
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYK 241
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 238
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 241 bits (591), Expect = 2e-63
Identities = 114/204 (55%), Positives = 144/204 (70%), Gaps = 1/204 (0%)
Frame = +3
Query: 243 VQDKNKYNTPKYRLXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 422
+QDKNKYNTPKYR+ VR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 423 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 602
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 603 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKSMLKYTGLTSXGLHVAEYMRSLEQDDED 782
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+ + G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 783 SFXRQFSXXL-NXESLXML*XIYR 851
++ +QFS + N + M+ +Y+
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYK 241
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 238
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 241 bits (591), Expect = 2e-63
Identities = 114/204 (55%), Positives = 144/204 (70%), Gaps = 1/204 (0%)
Frame = +3
Query: 243 VQDKNKYNTPKYRLXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 422
+QDKNKYNTPKYR+ VR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 423 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 602
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 603 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKSMLKYTGLTSXGLHVAEYMRSLEQDDED 782
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+ + G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 783 SFXRQFSXXL-NXESLXML*XIYR 851
++ +QFS + N + M+ +Y+
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYK 241
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 238
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 241 bits (590), Expect = 2e-63
Identities = 111/187 (59%), Positives = 136/187 (72%)
Frame = +3
Query: 243 VQDKNKYNTPKYRLXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 422
+QDKNKYNTPKYR+ VR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 423 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 602
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 164
Query: 603 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKSMLKYTGLTSXGLHVAEYMRSLEQDDED 782
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+ + G +VA+YMR L ++DED
Sbjct: 165 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 224
Query: 783 SFXRQFS 803
++ +QFS
Sbjct: 225 AYKKQFS 231
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 238
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 239 bits (586), Expect = 7e-63
Identities = 113/204 (55%), Positives = 143/204 (70%), Gaps = 1/204 (0%)
Frame = +3
Query: 243 VQDKNKYNTPKYRLXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 422
+QDKNKYNTPKYR+ VR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 423 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 602
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 603 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKSMLKYTGLTSXGLHVAEYMRSLEQDDED 782
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+ + G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 783 SFXRQFSXXL-NXESLXML*XIYR 851
++ +QFS + N + M+ +Y+
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYK 241
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 238
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 165 bits (400), Expect = 3e-40
Identities = 75/125 (60%), Positives = 89/125 (71%)
Frame = +3
Query: 282 LXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 461
+ VR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 462 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 641
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 642 LNVPH 656
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 116 bits (278), Expect = 2e-25
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +3
Query: 243 VQDKNKYNTPKYRLXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 422
+QDKNKYNTPKYR+ VR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 423 A 425
A
Sbjct: 98 A 98
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 238
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 93.5 bits (222), Expect = 9e-19
Identities = 45/89 (50%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = +3
Query: 588 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKSMLKYTGLTSXGLHVAEYMRSLE 767
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+ + G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 768 QDDEDSFXRQFSXXL-NXESLXML*XIYR 851
++DED++ +QFS + N + M+ +Y+
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYK 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,945,593
Number of Sequences: 237096
Number of extensions: 2448992
Number of successful extensions: 4133
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4108
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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