Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_A09
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   205   4e-53
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    31   0.85 
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    29   4.5  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  205 bits (500), Expect = 4e-53
 Identities = 101/190 (53%), Positives = 125/190 (65%)
 Frame = +3

Query: 243 VQDKNKYNTPKYRLXVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 422
           VQDKNKYNTPKYRL VR++NKDV  Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38  VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97

Query: 423 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 602
           AY+TG                          +YNVE  +     F+  LD+GLARTTTG+
Sbjct: 98  AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156

Query: 603 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKSMLKYTGLTSXGLHVAEYMRSLEQDDED 782
           ++F  MKG  DGG+NVPHS  RF G+D ESK+   +       G HVA+YM  L+++DED
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDED 216

Query: 783 SFXRQFSXXL 812
            + RQFS  L
Sbjct: 217 RYKRQFSKFL 226



 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +2

Query: 131 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 238
           MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 522 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 698
           N EP++   G F C+L       TT+G+R  G      +  L    + ++FPG    +  
Sbjct: 68  NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127

Query: 699 SMLK 710
            ++K
Sbjct: 128 FIIK 131


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 366  KQRTQYGHLQSESRPPGMLHLCWRDAXSDDI*VCYI-CS 253
            +QR     ++ + + P   HLC R++   DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 366  KQRTQYGHLQSESRPPGMLHLCWRDAXSDDI*VCYI-CS 253
            +QR     ++ + + P   HLC R++   DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,723,382
Number of Sequences: 27780
Number of extensions: 384377
Number of successful extensions: 878
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)