Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_A04
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 36 0.050
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 34 0.12
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 33 0.27
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 33 0.27
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 31 1.1
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 31 1.1
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 31 1.1
Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical pr... 30 2.5
U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 3.3
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 29 5.8
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 5.8
Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical pr... 28 7.6
U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate recep... 28 7.6
U39851-1|AAF99869.2| 281|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic gl... 28 7.6
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 35.5 bits (78), Expect = 0.050
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Frame = +1
Query: 157 VNVRMGTKLLDLETILL--RNEQWM----KLEEDWKPVDLDEDRTEEDNEPAMTTMLSAL 318
V R+ TK LD + +L +NEQ M +LE D +R + E + + SAL
Sbjct: 3 VEDRLKTKALDKKCRVLVEQNEQLMARLCELEMSHGGADETRERRLAEQEERIRQISSAL 62
Query: 319 DLKKTTFDSAQLLKKVRRKVARQLSDKSIIDY---NDFIRNLQNNEANDQQFFFVNGQII 489
+ ++ D Q L++ + + ++L +K + N F R+++ + Q
Sbjct: 63 ESER---DVGQRLREAKEVLEKELMNKKKTEEASNNRFQRDVEMSRMEAQN--------- 110
Query: 490 SAVSIEEICREIDDIFKSIDRLASATSTLRNRKPDVVQCSISTGELSFDDTIDQID--EE 663
IEE+ E+D K ++ + S LR D +Q I T + + ++ D + E+
Sbjct: 111 ---KIEEMSVEVDAAHKKVNEVLSEVEQLRATNFD-LQMHIETAKRTMEELADCNEELEK 166
Query: 664 KIDQCIEEAFEE 699
++D+ EEA EE
Sbjct: 167 RVDE-YEEAAEE 177
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 34.3 bits (75), Expect = 0.12
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Frame = +1
Query: 358 KKVRRKVARQLSD-KSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDI 534
KK+ +A+ S ID DF + + N + + ++ + IE+ ++ + +
Sbjct: 74 KKLHSFLAQSTDQVNSTIDKMDFFCS-KGNHSLPMEMSVLSITLPYEACIEKSAKKHETM 132
Query: 535 FKSIDRLASATSTLRNRKPDVVQCSISTGELSF--DDTIDQIDEE-KIDQCIEEAFEELS 705
SID ++SA L N K DV + STG+L F + I ++ EE +++ +E +LS
Sbjct: 133 VFSIDEVSSAVQHLENEKVDVEKRQSSTGKLIFQTEKEIMKLKEEIQVNTNLESNIIQLS 192
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 33.1 bits (72), Expect = 0.27
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +1
Query: 322 LKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNN-EANDQQFFFVNGQIISAV 498
LK T D+ +L+K+ R R L+D + + L A Q + Q+
Sbjct: 324 LKTVTEDNGKLMKQARE--LRDLNDYEFARFRQQEQELTETLRATQDQMADLQEQLTGVE 381
Query: 499 SIEEICR-EIDDIFKSIDRLASATSTLRNRKPDVVQCSISTGELS-FDDTIDQIDEEKID 672
I + E + + S++ L+ A+ LRN++ ++ + EL+ F++T+D++ +EK++
Sbjct: 382 KIRASLKSENESLSASVEELSVAS--LRNKQDADNSKTMLSEELARFEETVDKLRQEKLE 439
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 33.1 bits (72), Expect = 0.27
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +1
Query: 322 LKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNN-EANDQQFFFVNGQIISAV 498
LK T D+ +L+K+ R R L+D + + L A Q + Q+
Sbjct: 324 LKTVTEDNGKLMKQARE--LRDLNDYEFARFRQQEQELTETLRATQDQMADLQEQLTGVE 381
Query: 499 SIEEICR-EIDDIFKSIDRLASATSTLRNRKPDVVQCSISTGELS-FDDTIDQIDEEKID 672
I + E + + S++ L+ A+ LRN++ ++ + EL+ F++T+D++ +EK++
Sbjct: 382 KIRASLKSENESLSASVEELSVAS--LRNKQDADNSKTMLSEELARFEETVDKLRQEKLE 439
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +1
Query: 250 VDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIR 429
VD DE+ TEE+ E TT S TT A KKV + +LS+K + F+R
Sbjct: 521 VDDDEEGTEEEEEEVSTTEKSTTTTTTTT--EASKSKKVNMERFWRLSNKP-SGKSPFLR 577
Query: 430 NLQNNE 447
+ Q N+
Sbjct: 578 HSQGNK 583
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +1
Query: 250 VDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIR 429
VD DE+ TEE+ E TT S TT A KKV + +LS+K + F+R
Sbjct: 521 VDDDEEGTEEEEEEVSTTEKSTTTTTTTT--EASKSKKVNMERFWRLSNKP-SGKSPFLR 577
Query: 430 NLQNNE 447
+ Q N+
Sbjct: 578 HSQGNK 583
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 538 KSIDRLASATSTLRN-RKPDVVQCSISTGELSFDDTIDQID--EEKIDQCIEEAFEEL 702
K +DR+ +T T+ N + ++ + + + +TID D EE +++ IEE F+E+
Sbjct: 166 KVMDRMRGSTMTMDNGMRKELEEALVDELAKNLGETIDNTDITEEDLEKLIEEGFDEV 223
>Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical
protein F49E11.7 protein.
Length = 402
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 382 RQLSDKSIIDYNDFIRN--LQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFKSIDRL 555
+ DK + D N+F++ N N +Q + +++ + E +DD I
Sbjct: 18 KMTDDKKMFDINEFLKRHLFVKNWVNYRQQSYTKYELMQLIESVEAALSVDDTLAKISPP 77
Query: 556 ASATSTLRNRKPDVVQ 603
+ + + PD+V+
Sbjct: 78 VTIVGDIHGQYPDLVR 93
>U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical
protein F52E4.7 protein.
Length = 848
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 517 REIDDIFKS-IDRLASATSTLRNRKP-DVVQCSISTGELSFDDTIDQIDEEKIDQCIEEA 690
R D+ F++ I+++ A S+ + K + S+ + SF T +ID E + Q IE
Sbjct: 419 RLFDNFFETLINKVPKANSSEKKSKANESANISLRSDNQSFLSTSSEIDTEVLPQLIETV 478
Query: 691 FEELS 705
ELS
Sbjct: 479 LAELS 483
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 622 ELSFDDTIDQIDEEKIDQCIEEAFEELSGSSQVCARMKQPGISDDSSQKGXFSIEQSD 795
+L+FDD D+ DEE D+ +EE EE + K P + SQ E SD
Sbjct: 374 KLNFDDDSDEEDEE--DEEVEEEDEEEEEEEEDVPAKKAPVLKQSLSQIAQAIEEDSD 429
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 28.7 bits (61), Expect = 5.8
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +1
Query: 208 RNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQL--LKKVRRKVA 381
+NEQ +LEE + ++ DR ++E A+ TM + T S L LK+ K
Sbjct: 66 QNEQEARLEELRRSAKIENDRKNREDELAIETMKFENSQRNTEVYSPYLDSLKEKSLKQD 125
Query: 382 RQLSDKSIIDYNDFI-RNLQNNEANDQQFFFVNGQIISAVSIEEICREIDD 531
Q + I N+ + R L+ +A ++ + Q I EE C+++++
Sbjct: 126 EQFRNNKIRFKNEEMDRTLKYQQAQEEH--TLRRQKIDE-EFEEKCQKLNE 173
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 202 LLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAM 297
L++++ W++L E WK V + EED EP +
Sbjct: 3308 LIKDKSWLELSERWKTV-----QDEEDQEPVL 3334
>Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical
protein R04D3.2 protein.
Length = 406
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1
Query: 259 DEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQ 438
+ED E++++P MT S + + FD K R AR+ ++K+ D D ++
Sbjct: 312 NEDNEEDESKPRMTNRRSRNEDEDDFFDDEDDSKPQRNPKARRGNEKN-FDNADSYDEVE 370
Query: 439 NNEAND 456
N++ D
Sbjct: 371 NDDDYD 376
>U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 8 protein.
Length = 489
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 283 NEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNNEAN 453
N+ + LS + L K + S K+R V R + K I DY ++ + NE N
Sbjct: 323 NDGILPVYLS-IPLVKNSIYSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINECN 378
>U39851-1|AAF99869.2| 281|Caenorhabditis elegans Hypothetical
protein C23G10.5 protein.
Length = 281
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 535 FKSIDRLASATSTLRNRKPDVVQCSISTGELSFDDTIDQIDEE 663
F S + A+ + + +KP + CSI T +D D++DE+
Sbjct: 70 FDSEEEYATFVNWIEAKKPSITDCSIETFNDDLED-FDRLDED 111
>AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic
glutamate receptor GLR-8 protein.
Length = 406
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 283 NEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNNEAN 453
N+ + LS + L K + S K+R V R + K I DY ++ + NE N
Sbjct: 315 NDGILPVYLS-IPLVKNSIYSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINECN 370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,050,474
Number of Sequences: 27780
Number of extensions: 291929
Number of successful extensions: 1111
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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