Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_A02
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0332 + 24477289-24477339,24477602-24477877,24478565-244787...    29   5.0  
01_06_0066 - 26113761-26114683,26115031-26115106,26115204-261154...    29   5.0  
03_06_0350 - 33306753-33307060,33307133-33307193,33307283-333074...    29   6.7  
07_03_1540 - 27570605-27571375,27571474-27572748,27572769-275729...    28   8.8  
07_03_1061 + 23651404-23651625,23651764-23652954                       28   8.8  

>04_04_0332 +
           24477289-24477339,24477602-24477877,24478565-24478702,
           24478799-24480343
          Length = 669

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 166 PNXXGGWPIRLAARHGLFAVVKLFIQFGA 252
           P+  G  P+ LAAR G  AV +L I +GA
Sbjct: 490 PDGDGYTPLMLAAREGHAAVCELLISYGA 518


>01_06_0066 -
           26113761-26114683,26115031-26115106,26115204-26115401,
           26115829-26116014,26116292-26116447,26116486-26116731,
           26116832-26117149,26117235-26117292,26117472-26117837,
           26119300-26119604
          Length = 943

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +1

Query: 148 LRSGLNPNXX---GGWPIRLAARHGLFAVVKLFIQFGADPHLLSGTG 279
           L+ G++PN     G   + +AA  G    V+L +++GADP+     G
Sbjct: 594 LKRGMDPNESDNDGHTALHIAASKGNEQCVRLLLEYGADPNARDSEG 640


>03_06_0350 -
           33306753-33307060,33307133-33307193,33307283-33307458,
           33307551-33307608,33307730-33307834,33307924-33307981,
           33308072-33308238
          Length = 310

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 302 VFSGKHWNTDNWIFLLSYCDSSQLADGAAVAIVFKNVVALKQILATGRCN 451
           V  G+ W+   WI + SY ++S +      + + +N  A     A+G CN
Sbjct: 239 VIEGEKWSAPKWIHVRSYDNASSMKQSEECSDLSENCAAW---AASGECN 285


>07_03_1540 -
           27570605-27571375,27571474-27572748,27572769-27572921,
           27572923-27573159
          Length = 811

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 479 KTLDQLAKGYKVSNWLEAPGSSHFPENEANRPLIITTRPINSR 607
           KT+   AK  +V NW+    ++ F E+EA R  ++ T P + R
Sbjct: 756 KTVVWSAKSGQVVNWVYEEANATFIEDEAMRKRLMDTNPNSFR 798


>07_03_1061 + 23651404-23651625,23651764-23652954
          Length = 470

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 115 IHAXLXGLIXFLRSGLNPNXXGGWPIRLAARHGLFAVVKL-FIQFG 249
           +H+ L G       G NPN  GG+ +R+  R+GL    +  F  FG
Sbjct: 206 VHSFLNGF----NQGYNPNPIGGYGMRVDGRYGLLTGARNGFSSFG 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,736,209
Number of Sequences: 37544
Number of extensions: 373492
Number of successful extensions: 893
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)