BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_A01
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical pr... 105 5e-23
Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical pr... 101 5e-22
Z99710-3|CAB16864.1| 679|Caenorhabditis elegans Hypothetical pr... 101 7e-22
Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z99710-1|CAB16867.1| 674|Caenorhabditis elegans Hypothetical pr... 98 6e-21
Z99710-7|CAJ58493.1| 645|Caenorhabditis elegans Hypothetical pr... 94 1e-19
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 89 4e-18
Z99710-2|CAE54894.1| 562|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z29117-1|CAA82376.1| 659|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 37 0.022
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 31 0.81
Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 29 4.3
>Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical
protein F59F4.1 protein.
Length = 667
Score = 105 bits (251), Expect = 5e-23
Identities = 71/226 (31%), Positives = 103/226 (45%), Gaps = 1/226 (0%)
Frame = +2
Query: 173 NADLIKERSKCTFNITELTNLIDGGAHLTXXXXXXXXXXXXXGIHIDQVPSEYLSHKEKY 352
N D+ ER K TF+ ++ I GG + D VP+E++S +E+
Sbjct: 10 NVDITNERKKATFDTERMSAWIHGGTEVMKRRREILDFVKSVDDFKDPVPTEFMSREERI 69
Query: 353 ELAIKKASLMFKLLRKWQEEENTGMENYRAVLGGALGSAILEDGSPLTLHYVMFIPTLMG 532
+K M + + G Y L +G D ++LHYVMFIPTL G
Sbjct: 70 LNNARKVVAMTNNTDQIDGSDFFGEGMYYQAL--TMG----RDLHAMSLHYVMFIPTLQG 123
Query: 533 QGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRPPRLKEFVLHSPSFNC 712
Q +Q W+ + + ++GTYAQTELGHG + + P +EFV++SP+
Sbjct: 124 QTDDDQLDEWLTKTISRAVVGTYAQTELGHG-TNLSKLETTATYDPATEEFVMNSPTITA 182
Query: 713 I*MVARRIGSPGXYGIVMAXLXPPGNARDP-AFIVQXRXEXTHMPL 847
+G Y +V+A L G + P FIVQ R E TH PL
Sbjct: 183 AKWWPGGLGKSSNYAVVVAQLYTKGECKGPHPFIVQLRDEDTHYPL 228
>Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical
protein F08A8.4 protein.
Length = 662
Score = 101 bits (243), Expect = 5e-22
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 3/228 (1%)
Frame = +2
Query: 173 NADLIKERSKCTFNITELTNLIDGGAHLTXXXXXXXXXXXXXGIHIDQVPSEYLSHKEKY 352
N DL +ER K TF+ ++ +I G L D P ++ EK
Sbjct: 12 NPDLTEEREKGTFDTDKMAAVIYGSEKLARRRREISEAVSKIPELADTQPFPFMDRLEKI 71
Query: 353 ELAIKKASLMFKLLRKWQEEENTG--MENYRAVLGGALGSAILEDGSPLTLHYVMFIPTL 526
+K ++ +R + ++ G + Y+ V G +G PL LH VMFIP L
Sbjct: 72 TEGSRKLEVLNNNIRDIIDYDDNGERLHIYQEVTG--------MEGHPLALHEVMFIPAL 123
Query: 527 MGQGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRPPRLKEFVLHSPSF 706
+ Q + EQQ W+GRA +IIG YAQTE+GHG + + P +EFVL++P+
Sbjct: 124 VSQASKEQQEKWLGRARRREIIGCYAQTEMGHG-TNLRKLETTATYFPDTQEFVLNTPTT 182
Query: 707 NCI*MVARRIGSPGXYGIVMAXLXPPGNARDP-AFIVQXRXEXTHMPL 847
+ +G Y +V+ + G + P F+VQ R E TH+PL
Sbjct: 183 TALKWWPGALGKSSNYAVVVVDMIIKGKSYGPHPFMVQLRDEKTHIPL 230
>Z99710-3|CAB16864.1| 679|Caenorhabditis elegans Hypothetical
protein F08A8.2 protein.
Length = 679
Score = 101 bits (242), Expect = 7e-22
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Frame = +2
Query: 173 NADLIKERSKCTFNITELTNLIDGGAHLTXXXXXXXXXXXXXGIHIDQVPSEYLSHKEKY 352
N +L++ER TF+ ++ +I G D P +L+ +EK
Sbjct: 11 NPELLEERRMATFDTDKMAAVIYGSEEFARRRREITDAVSKIPELADIKPYPFLTREEKV 70
Query: 353 ELAIKKASLMFKLLRKW--QEEENTGMENYRAVLGGALGSAILEDGSPLTLHYVMFIPTL 526
+K S++ K L + ++ E + +R V+G +G P LH +FIPTL
Sbjct: 71 TEGTRKISILTKYLNQLIDRDNEEESLHLHREVIG--------YEGHPFALHDALFIPTL 122
Query: 527 MGQGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRPPRLKEFVLHSPSF 706
Q + EQQ W+ RA +IIG YAQTELGHG + + + + +EFVLH+P+
Sbjct: 123 QSQASDEQQEKWLERARRREIIGCYAQTELGHG-SNLRNLETTAVYDIASQEFVLHTPTT 181
Query: 707 NCI*MVARRIGSPGXYGIVMAXLXPPGNARDP-AFIVQXRXEXTHMPL 847
+ +G Y +V+A L N P F+VQ R E TH+PL
Sbjct: 182 TALKWWPGALGKSCNYALVVAELIIKRNNYGPHFFMVQLRDEKTHIPL 229
>Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical
protein F08A8.3 protein.
Length = 660
Score = 100 bits (240), Expect = 1e-21
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Frame = +2
Query: 173 NADLIKERSKCTFNITELTNLIDGGAHLTXXXXXXXXXXXXXGIHIDQVPSEYLSHKEKY 352
N+DL +ER TF+ ++ +I G + + P +++ +EK
Sbjct: 9 NSDLTEERKNATFDTDKMAAVIYGREEIASRRRQLTESISRIHELAESKPLVFMTREEKI 68
Query: 353 ELAIKKASLMFKLLRKW---QEEENTGMENYRAVLGGALGSAILEDGSPLTLHYVMFIPT 523
+ +K ++ + + ++ E + YR VLG +G PL LH MFIPT
Sbjct: 69 AESCRKLEVLSRHWNQTPFNRDNEEDALHIYREVLG--------MEGHPLALHDTMFIPT 120
Query: 524 LMGQGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRPPRLKEFVLHSPS 703
L+ Q + EQQ W+GRA +IIG YAQTE+GHG + + P +EF+L++P+
Sbjct: 121 LVAQASQEQQEKWLGRARRKEIIGCYAQTEMGHG-TNLRKLETTATYSPDTQEFILNTPT 179
Query: 704 FNCI*MVARRIGSPGXYGIVMAXLXPPGNARDP-AFIVQXRXEXTHMPL 847
+ +G IV+A L P F+VQ R E TH+PL
Sbjct: 180 ITALKWWPGALGKSSNNAIVVANLLIKDQNYGPHPFMVQLRDEKTHIPL 228
>Z99710-1|CAB16867.1| 674|Caenorhabditis elegans Hypothetical
protein F08A8.1a protein.
Length = 674
Score = 98.3 bits (234), Expect = 6e-21
Identities = 71/227 (31%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Frame = +2
Query: 173 NADLIKERSKCTFNITELTNLIDGGAHLTXXXXXXXXXXXXXGIHIDQVPSEYLSHKEKY 352
N DL ER TF+ + I GG D +P Y++ +EK
Sbjct: 13 NPDLTAERLTATFDTHAMAAQIYGGEMRARRRREITAKLAEIPELHDSMPLPYMTREEKI 72
Query: 353 ELAIKKASLMFKLLRKWQEEENTGMENYRAVLGGALGSAILE-DGSPLTLHYVMFIPTLM 529
+ +K +++ + + + + + G E Y L + +L +G+P+ LH VMFIP L
Sbjct: 73 MESARKLTVLTQRMSEIIDPTDAG-ELYH------LNNEVLGIEGNPMALHGVMFIPALN 125
Query: 530 GQGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRPPRLKEFVLHSPSFN 709
Q + EQQA W+ RA +IIGTYAQTE+GHG + + + +EFVLH+P
Sbjct: 126 AQASDEQQAKWLIRALRREIIGTYAQTEMGHG-TNLQNLETTATYDIGTQEFVLHTPKIT 184
Query: 710 CI*MVARRIGSPGXYGIVMAXLXPPGNARDP-AFIVQXRXEXTHMPL 847
+ +G Y +V+A + G P F+V R E TH PL
Sbjct: 185 ALKWWPGNLGKSSNYAVVVAHMYIKGKNFGPHTFMVPLRDEKTHKPL 231
>Z99710-7|CAJ58493.1| 645|Caenorhabditis elegans Hypothetical
protein F08A8.1c protein.
Length = 645
Score = 94.3 bits (224), Expect = 1e-19
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Frame = +2
Query: 311 DQVPSEYLSHKEKYELAIKKASLMFKLLRKWQEEENTGMENYRAVLGGALGSAILE-DGS 487
D +P Y++ +EK + +K +++ + + + + + G E Y L + +L +G+
Sbjct: 30 DSMPLPYMTREEKIMESARKLTVLTQRMSEIIDPTDAG-ELYH------LNNEVLGIEGN 82
Query: 488 PLTLHYVMFIPTLMGQGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRP 667
P+ LH VMFIP L Q + EQQA W+ RA +IIGTYAQTE+GHG + + +
Sbjct: 83 PMALHGVMFIPALNAQASDEQQAKWLIRALRREIIGTYAQTEMGHG-TNLQNLETTATYD 141
Query: 668 PRLKEFVLHSPSFNCI*MVARRIGSPGXYGIVMAXLXPPGNARDP-AFIVQXRXEXTHMP 844
+EFVLH+P + +G Y +V+A + G P F+V R E TH P
Sbjct: 142 IGTQEFVLHTPKITALKWWPGNLGKSSNYAVVVAHMYIKGKNFGPHTFMVPLRDEKTHKP 201
Query: 845 L 847
L
Sbjct: 202 L 202
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 89.0 bits (211), Expect = 4e-18
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 1/226 (0%)
Frame = +2
Query: 173 NADLIKERSKCTFNITELTNLIDGGAHLTXXXXXXXXXXXXXGIHIDQVPSEYLSHKEKY 352
N D+ +ER K +FN+ +LT GG D P+ ++S E
Sbjct: 10 NPDITEERKKASFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPTPFMSRDELI 69
Query: 353 ELAIKKASLMFKLLRKWQEEENTGMENYRAVLGGALGSAILEDGSPLTLHYVMFIPTLMG 532
+ +++K + M K ++ + T +E L + D +LHY+MF+P L
Sbjct: 70 DNSVRKLAGMAK---NYKMIDLTNIEKTTYFLQ----LVHVRDSMAFSLHYLMFLPVLQS 122
Query: 533 QGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRPPRLKEFVLHSPSFNC 712
Q + EQ A W+ RA + IIGTYAQTE+GHG + + + EFVLH+P+ +
Sbjct: 123 QASPEQLAEWMPRALSGTIIGTYAQTEMGHG-TNLSKLETTATYGQKTSEFVLHTPTISG 181
Query: 713 I*MVARRIGSPGXYGIVMAXLXPPGNARDP-AFIVQXRXEXTHMPL 847
+G + I++A L G P F+VQ R TH L
Sbjct: 182 AKWWPGSLGKFCNFAIIVANLWTNGVCVGPHPFLVQIRDLKTHKTL 227
>Z99710-2|CAE54894.1| 562|Caenorhabditis elegans Hypothetical
protein F08A8.1b protein.
Length = 562
Score = 83.4 bits (197), Expect = 2e-16
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +2
Query: 491 LTLHYVMFIPTLMGQGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRPP 670
+ LH VMFIP L Q + EQQA W+ RA +IIGTYAQTE+GHG + + +
Sbjct: 1 MALHGVMFIPALNAQASDEQQAKWLIRALRREIIGTYAQTEMGHG-TNLQNLETTATYDI 59
Query: 671 RLKEFVLHSPSFNCI*MVARRIGSPGXYGIVMAXLXPPGNARDP-AFIVQXRXEXTHMPL 847
+EFVLH+P + +G Y +V+A + G P F+V R E TH PL
Sbjct: 60 GTQEFVLHTPKITALKWWPGNLGKSSNYAVVVAHMYIKGKNFGPHTFMVPLRDEKTHKPL 119
>Z29117-1|CAA82376.1| 659|Caenorhabditis elegans Hypothetical
protein C48B4.1 protein.
Length = 659
Score = 73.3 bits (172), Expect = 2e-13
Identities = 49/177 (27%), Positives = 80/177 (45%)
Frame = +2
Query: 173 NADLIKERSKCTFNITELTNLIDGGAHLTXXXXXXXXXXXXXGIHIDQVPSEYLSHKEKY 352
N DL ER K TF+ L + GG D +P + + E+
Sbjct: 12 NQDLTDERFKATFDTDALAAVFHGGEDALKRIRELRDEVTKRWHLFDALPGAHRTRAERM 71
Query: 353 ELAIKKASLMFKLLRKWQEEENTGMENYRAVLGGALGSAILEDGSPLTLHYVMFIPTLMG 532
E +K + + + ++ + N + ++ +G +G PL LH +MF+PT+
Sbjct: 72 EDVSRKLKNLMESVGEFADFTNN--LDMLVIIRDVMGI----EGFPLALHNLMFVPTIQN 125
Query: 533 QGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRPPRLKEFVLHSPS 703
Q EQ +W+ A IIGTYAQTELGHG + + + +EF++H+P+
Sbjct: 126 QADDEQTEWWLMDALQGKIIGTYAQTELGHG-TNLGAIETTATYDKLTEEFIIHTPT 181
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +3
Query: 624 GTFVRGLETTATYDPQD*RNLYYTVHXLTAYKWWPGGLAPXATMV 758
GT + +ETTATYD + +T TA KWWPGGL T V
Sbjct: 156 GTNLGAIETTATYDKLTEEFIIHTP-TTTATKWWPGGLGTSCTHV 199
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 36.7 bits (81), Expect = 0.022
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 4/230 (1%)
Frame = +2
Query: 170 INADLI-KERSKCTFNITELTNLIDGGAHLTXXXXXXXXXXXXXGIHIDQVPSEYLSHKE 346
++A LI K R TF+ +L ++G H+ H D LS +E
Sbjct: 1 MSAPLIDKYRKMATFDWKKLKAAVEGEEHVRLKSEVVAKMKSEPVFHRDY---RVLSREE 57
Query: 347 KYELAIKKASLMFKLLRKWQ--EEENTGMENYRAVLGGALGSAILEDGSPLTLHYVMFIP 520
+ E+ ++ +K + +W ++ + +EN+ A L L + + L LH +F
Sbjct: 58 QREVVHQR----WKKIVEWGLFKDPYSDLENFHA-LTETLEAYDQGTSARLFLHGNVFGA 112
Query: 521 TLMGQGTVEQQAYWIGRAFNVDIIGTYAQTELGHGYFRPWS*DNSNIRPPRLKEFVLHSP 700
+ GT ++ I + N +I+G + TE+GHG + E V ++P
Sbjct: 113 AVKSMGT-DRHKDLIQKTENNEIVGAFCLTEVGHGSNTA---EIQTTATFDNGELVFNTP 168
Query: 701 SFNCI*MVARRIGSPGXYGIVMAXLXPPG-NARDPAFIVQXRXEXTHMPL 847
S + I A + + +V A L G N F++Q R T L
Sbjct: 169 SVSAIKCWAGNLAHSATHVVVYAQLHVEGKNEGFHGFVIQVRCPRTFQTL 218
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 412 GEHRNGKLQGCARWCSWIS-NPRRWLSSHP-ALCDVYTNIDGARNSRTTSILDR 567
G+++ ++ R+ S + P W +HP LCD + +I RT ++DR
Sbjct: 153 GQYKYNEIHNLCRFISVMKFRPMVWKDAHPYVLCDRFEDITNVETLRTDPLIDR 206
>Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.6 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 231 FVNSVILNVHLLLSFIKSAFIFVLVMIITNY 139
FVN V++NV L + F FVLV+II Y
Sbjct: 85 FVNPVMINVPAFLLILSQCFAFVLVIIIGFY 115
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
protein F59F3.5 protein.
Length = 1199
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 742 PXXLWYRDGSXVTAGKCPGSRLHRSVXRXXDSYAF 846
P W++DG T GK G+ LH S D+ F
Sbjct: 712 PDYTWFKDGYPYTKGKVIGNALHVSKAEKRDNGIF 746
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,402,630
Number of Sequences: 27780
Number of extensions: 383133
Number of successful extensions: 864
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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