Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_P24
(947 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8; Bilater... 68 4e-10
UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1; ... 67 7e-10
UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10; Euther... 66 1e-09
UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42; Coelom... 61 5e-08
UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8; Metazoa... 61 5e-08
UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|R... 59 1e-07
UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Ho... 59 1e-07
UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whol... 59 2e-07
UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S riboso... 57 8e-07
UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17; Dikary... 54 7e-06
UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28; Fungi/... 53 1e-05
UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago t... 51 5e-05
UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14; Eukary... 51 5e-05
UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8; Eukaryo... 50 1e-04
UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7; Eukaryo... 50 1e-04
UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11; Euka... 49 2e-04
UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa di... 47 6e-04
UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4; Arabi... 47 8e-04
UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lambl... 45 0.003
UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1; Ostre... 41 0.040
UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=... 38 0.28
UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillar... 38 0.49
UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133, w... 36 2.0
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 35 2.6
>UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8;
Bilateria|Rep: 40S ribosomal protein S21 - Homo sapiens
(Human)
Length = 83
Score = 67.7 bits (158), Expect = 4e-10
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +3
Query: 204 QLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKNY 356
Q+ +A+VD TGR K Y +CGAIRRMGESDD I+RL K DGI++KN+
Sbjct: 33 QMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSKNF 83
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
NDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 3 NDAGEFVDLYVPRKCSASNRIIGAKDHAS 31
>UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 95
Score = 66.9 bits (156), Expect = 7e-10
Identities = 29/50 (58%), Positives = 38/50 (76%)
Frame = +3
Query: 204 QLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKN 353
Q+ I DV+P TGR +TS +Y +C IRR+GESDDCIVRL KK+ ++KN
Sbjct: 45 QINIVDVNPVTGRMLETSTVYAICDVIRRLGESDDCIVRLAKKNLKISKN 94
Score = 59.3 bits (137), Expect = 1e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHA 196
NDAG FVDLYCPRKCS+S R+IHAKDHA
Sbjct: 15 NDAGGFVDLYCPRKCSSSKRIIHAKDHA 42
>UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10;
Eutheria|Rep: 40S ribosomal protein S21 - Mus musculus
(Mouse)
Length = 83
Score = 66.1 bits (154), Expect = 1e-09
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +3
Query: 204 QLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKNY 356
Q+ +A+VD TGR K Y +CGAIRRMGESDD I+RL K DGI++KN+
Sbjct: 33 QMNVAEVDRTTGRFNGQFKTYGICGAIRRMGESDDSILRLAKADGIVSKNF 83
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
NDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 3 NDAGEFVDLYVPRKCSASNRIIAAKDHAS 31
>UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42;
Coelomata|Rep: 40S ribosomal protein S21 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 81
Score = 60.9 bits (141), Expect = 5e-08
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +3
Query: 204 QLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAK 350
Q+ IA+VD TGR K Y +CGAIRRMGE+DD ++RL K D I+AK
Sbjct: 33 QINIAEVDRVTGRFNGQFKTYAICGAIRRMGEADDSLLRLAKTDSIVAK 81
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
NDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 3 NDAGEFVDLYVPRKCSASNRIIGAKDHAS 31
>UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8;
Metazoa|Rep: 40S ribosomal protein S21 - Caenorhabditis
elegans
Length = 88
Score = 60.9 bits (141), Expect = 5e-08
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +3
Query: 204 QLVIADVDPATGRAAD-TSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKN 353
Q+ DVDP TGR S Y +CGAIRRMGESDD I+RL +KDG++ ++
Sbjct: 33 QIDFVDVDPETGRMIPGKSTRYAICGAIRRMGESDDAILRLAQKDGLVPRD 83
Score = 50.0 bits (114), Expect = 9e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
NDAG+ V+LY PRKCS+SNR+I KDHAS
Sbjct: 3 NDAGQTVELYVPRKCSSSNRIIGPKDHAS 31
>UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|Rep:
Ribosomal protein S21 - Homo sapiens (Human)
Length = 66
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
NDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 3 NDAGEFVDLYVPRKCSASNRIIGAKDHAS 31
>UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Homo
sapiens|Rep: 8.2 kDa differentiation factor - Homo
sapiens (Human)
Length = 97
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
NDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 3 NDAGEFVDLYVPRKCSASNRIIGAKDHAS 31
>UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whole
genome shotgun sequence; n=2; Deuterostomia|Rep:
Chromosome undetermined SCAF15610, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 51
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = +3
Query: 207 LVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAK 350
L + VD TGR K Y +CGAIRRMGESDD I+RL K D ++AK
Sbjct: 4 LHLPQVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKNDSVIAK 51
>UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S ribosomal
protein S21; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S21 - Rattus norvegicus
Length = 326
Score = 56.8 bits (131), Expect = 8e-07
Identities = 29/67 (43%), Positives = 36/67 (53%)
Frame = +2
Query: 101 IKCMNDAGEFVDLYCPRKCSASNRLIHAKDHASXTASDXXXXXXXXXXXXXI*NVCCLWG 280
+ NDAGEFVDLY PRKCS+SN +I KDH S + N+ L G
Sbjct: 259 LSVQNDAGEFVDLYVPRKCSSSNHIITVKDHTSIQLNVAKVDRSTGWFNGQFKNLQHLRG 318
Query: 281 YPKDGRV 301
+ +DGRV
Sbjct: 319 HSQDGRV 325
>UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17;
Dikarya|Rep: 40S ribosomal protein S21 -
Schizosaccharomyces pombe (Fission yeast)
Length = 87
Score = 53.6 bits (123), Expect = 7e-06
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
N+AG+ VDLY PRKCSA+NR+I AKDHAS
Sbjct: 3 NEAGQLVDLYVPRKCSATNRIIQAKDHAS 31
Score = 41.9 bits (94), Expect = 0.023
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 204 QLVIADVDPATGRAADTSKM-YVVCGAIRRMGESDDCIVRLTKKDGIL 344
Q+ + VD A GR K Y + G +R GESDDCI RLT +DG+L
Sbjct: 33 QINVCAVD-AEGRQIPGEKTTYAISGFVRSKGESDDCINRLTTQDGLL 79
>UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28;
Fungi/Metazoa group|Rep: 40S ribosomal protein S21 -
Botryotinia fuckeliana B05.10
Length = 88
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHASXTAS 211
ND GE VDLY PRKCSA+NR+I AKDH S S
Sbjct: 3 NDKGELVDLYVPRKCSATNRIIKAKDHGSVQIS 35
Score = 50.4 bits (115), Expect = 7e-05
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +3
Query: 204 QLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGIL 344
Q+ IA VD GRA +++Y +CG IR MGESDD + RL ++DG+L
Sbjct: 33 QISIAKVDE-NGRATGENQVYALCGFIRAMGESDDSLNRLAQRDGLL 78
>UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago
truncatula|Rep: Ribosomal protein S21e - Medicago
truncatula (Barrel medic)
Length = 106
Score = 50.8 bits (116), Expect = 5e-05
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +2
Query: 101 IKCMNDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
+K N+ G+ +LY PRKCSA+NRLI AKDHAS
Sbjct: 24 LKMQNEEGQITELYIPRKCSATNRLITAKDHAS 56
>UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14;
Eukaryota|Rep: 40S ribosomal protein S21 - Oryza sativa
subsp. japonica (Rice)
Length = 82
Score = 50.8 bits (116), Expect = 5e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
N+ G+ VDLY PRKCSA+NR+I AKDHAS
Sbjct: 3 NEEGQMVDLYVPRKCSATNRIITAKDHAS 31
>UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8;
Eukaryota|Rep: 40S ribosomal protein S21 - Zea mays
(Maize)
Length = 81
Score = 49.6 bits (113), Expect = 1e-04
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
N+ G+ VDLY PRKCSA+NR+I AKDHAS
Sbjct: 3 NEEGKTVDLYVPRKCSATNRIITAKDHAS 31
>UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7;
Eukaryota|Rep: 40S ribosomal protein S21 - Cyanophora
paradoxa
Length = 82
Score = 49.6 bits (113), Expect = 1e-04
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
ND G+ VDLY PRKCSA+NRLI A DHA+
Sbjct: 3 NDEGKIVDLYIPRKCSATNRLISATDHAA 31
Score = 37.5 bits (83), Expect = 0.49
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 204 QLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGI 341
Q+ + VDP +G + +CG +R MGESD + RL K G+
Sbjct: 33 QINVGHVDPNSGLYTGDYTTFALCGFVRSMGESDAALNRLCVKHGL 78
>UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11;
Eukaryota|Rep: 40S ribosomal protein S21-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 87
Score = 48.8 bits (111), Expect = 2e-04
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
ND G+ V+LY PRKCSA+NR+I A DHAS
Sbjct: 3 NDKGQLVELYVPRKCSATNRIIKADDHAS 31
Score = 34.7 bits (76), Expect = 3.5
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 204 QLVIADVDPATGRAADTSKM-YVVCGAIRRMGESDDCIVRLTKKDGIL 344
Q+ +A VD GRA + Y + G +R GESDD + RL + DG+L
Sbjct: 33 QINVAKVDEE-GRAIPGEYVTYALSGYVRSRGESDDSLNRLAQNDGLL 79
>UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa
differentiation factor, partial; n=1; Pan
troglodytes|Rep: PREDICTED: similar to 8.2 kDa
differentiation factor, partial - Pan troglodytes
Length = 60
Score = 47.2 bits (107), Expect = 6e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
N+A EFVDLY PRKCS S+ +I AKDH S
Sbjct: 1 NNASEFVDLYIPRKCSTSHHVIGAKDHTS 29
>UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4;
Arabidopsis thaliana|Rep: 40S ribosomal protein S21-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 46.8 bits (106), Expect = 8e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
N+ G+ +LY PRKCSA+NRLI +KDHAS
Sbjct: 3 NEEGQVTELYIPRKCSATNRLITSKDHAS 31
>UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_72066_72335 - Giardia lamblia
ATCC 50803
Length = 89
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHASXTAS 211
N +G VD Y PRKCSA+NRLI KDHA+ S
Sbjct: 10 NSSGVVVDAYIPRKCSATNRLIGPKDHAAVQLS 42
>UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S21-maize -
Ostreococcus tauri
Length = 101
Score = 41.1 bits (92), Expect = 0.040
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 110 MNDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
+N GE VDLY PRKCS +NRLI A D AS
Sbjct: 30 INADGENVDLYIPRKCSWTNRLITATDKAS 59
>UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=4;
Trypanosoma cruzi|Rep: 40S ribosomal protein S21,
putative - Trypanosoma cruzi
Length = 251
Score = 38.3 bits (85), Expect = 0.28
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 113 NDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
N+ G VDLY PRKC A+N LI + DH++
Sbjct: 8 NEEGVNVDLYIPRKCHATNNLITSYDHSA 36
>UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillardia
theta|Rep: 40S ribosomal protein S21 - Guillardia theta
(Cryptomonas phi)
Length = 82
Score = 37.5 bits (83), Expect = 0.49
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 125 EFVDLYCPRKCSASNRLIHAKDHASXTAS 211
+ V Y PRKCS SN+LI+ KDHAS S
Sbjct: 7 KIVGEYIPRKCSLSNKLINNKDHASIQIS 35
>UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 35.5 bits (78), Expect = 2.0
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 110 MNDAGEFVDLYCPRKCSASNRLIHAKDHAS 199
+ND + VD+Y PRKC +N ++++ D++S
Sbjct: 2 INDEKQVVDIYVPRKCQYTNMILNSSDYSS 31
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.1 bits (77), Expect = 2.6
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 504 MIRYIDEFGQTTTXMQ 551
MIRYIDEFGQTTT MQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,232,047
Number of Sequences: 1657284
Number of extensions: 9404454
Number of successful extensions: 19173
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 18391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19127
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 87365783978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -