Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_P23
(994 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 45 2e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.015
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 35 0.015
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.020
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.047
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 0.059
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.083
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.44
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 3.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.1
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 23 3.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 7.2
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 7.2
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Frame = -2
Query: 519 PPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPP-----GPPXKXXXPPLXXGGG 361
PPPPPP P P P G PPPPP GPP PP GG
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 522 PPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPP 400
P P P P P P P PPPPP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 528 PXPPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGP 403
P P P PPP P P P G PPPPP P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPP----PPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.44
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = -3
Query: 488 KKXXXPXXXXXXPXPXXGXXPXPPPP--XXPXKKXXXPPXXXGGGPPXPP 345
K P P P P PPP PP G GPP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.5 bits (63), Expect = 0.77
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = -2
Query: 522 PPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPP 400
PPPPPPP P P G P P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -2
Query: 531 PPXPPPPPPPXXXXXKXPXXPXXXXXPXP 445
PP PPPPPP P P P
Sbjct: 775 PPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = -2
Query: 522 PPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPPXK 394
PPPPPPP P P P P P K
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.015
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Frame = -2
Query: 531 PPXPPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPP----PPGPPXKXXXPPLXXGG 364
P PPP P P P P P G P P PP P PP+
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAP-SGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Query: 363 GXPPSP 346
G PP P
Sbjct: 1119 GAPPVP 1124
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = -2
Query: 519 PPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPP---PPGPPXKXXXPPLXXGGGXPPS 349
PP P P P P P P P PP P PP+ G PP
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 348 P 346
P
Sbjct: 1162 P 1162
Score = 30.7 bits (66), Expect = 0.33
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 9/71 (12%)
Frame = -2
Query: 531 PPXPPPP--PPPXXXXXKXPXXP----XXXXXPXPXXGXXXXPPP---PPGPPXKXXXPP 379
PP P P PP P P P P G PPP PP P PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 378 LXXGGGXPPSP 346
+ PP P
Sbjct: 1210 VPPPSTAPPVP 1220
Score = 30.3 bits (65), Expect = 0.44
Identities = 17/62 (27%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Frame = -2
Query: 528 PXPPPPPPPXXXXXKXPXXP-XXXXXPXPXXGXXXXPPPPPGPPXKXXXPPLXXGGGXPP 352
P P PP P P P P PPP P P + G PP
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Query: 351 SP 346
P
Sbjct: 1085 VP 1086
Score = 30.3 bits (65), Expect = 0.44
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = -2
Query: 531 PPXPPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPP---PPGPPXKXXXPPL-XXGG 364
P PP P P P P P P P PP P PP+
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 363 GXPPSP 346
G PP P
Sbjct: 1177 GIPPVP 1182
Score = 30.3 bits (65), Expect = 0.44
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Frame = -2
Query: 519 PPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPP---PPGPPXKXXXPPL-XXGGGXPP 352
PP P P P P P G PPP PP P PP+ PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 351 SP 346
P
Sbjct: 1239 VP 1240
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = -2
Query: 531 PPXPPP---PPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPPXKXXXPPLXXGGG 361
PP PPP PP P P P P P PP P P K PP+
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL--PPVPVPTAK--APPVPAPSS 1244
Query: 360 XPPS 349
PS
Sbjct: 1245 EAPS 1248
Score = 29.5 bits (63), Expect = 0.77
Identities = 19/69 (27%), Positives = 20/69 (28%), Gaps = 7/69 (10%)
Frame = -2
Query: 531 PPXPPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGP-------PXKXXXPPLX 373
P PP P P P G PPP P P P PP+
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 372 XGGGXPPSP 346
G PP P
Sbjct: 1087 APSGIPPVP 1095
Score = 27.5 bits (58), Expect = 3.1
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 9/71 (12%)
Frame = -2
Query: 531 PPXPPP---PPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPP------PPGPPXKXXXPP 379
PP P P PP P P P P P P PP P PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 378 LXXGGGXPPSP 346
+ PP P
Sbjct: 1191 VPPPSEAPPVP 1201
Score = 25.8 bits (54), Expect = 9.5
Identities = 20/81 (24%), Positives = 20/81 (24%), Gaps = 5/81 (6%)
Frame = -3
Query: 575 PPXXGXGXXXXXXXXPPXPPPPXXPXXXXKKXXXPXXXXXXPXPXXGXXPXPPP---PXX 405
PP P PP P P P P P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 404 PXKKXXXP--PXXXGGGPPXP 348
P P P G PP P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVP 1182
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 35.1 bits (77), Expect = 0.015
Identities = 22/61 (36%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +2
Query: 353 GGXPPPXXRGGXXXFXGGPGGG-GGXXXXPXXGXGXXXXXGXXGXFXXFXXGGGGGGGXG 529
G P RGG F GG GG GG G G G G GG GG G
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
Query: 530 G 532
G
Sbjct: 189 G 189
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.020
Identities = 26/65 (40%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Frame = +1
Query: 346 GGXGGPPPXXXGGXXXFXXGXXGGGG--XGXXPXXGXGXXXXXXGXXXFXXXXXGXXGG- 516
GG GGPPP GG F G GG G G G G G F G GG
Sbjct: 195 GGSGGPPP-GPGGFGGF--GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 517 GGXGG 531
GG GG
Sbjct: 252 GGFGG 256
Score = 31.9 bits (69), Expect = 0.14
Identities = 25/61 (40%), Positives = 25/61 (40%)
Frame = +2
Query: 347 GXGGXPPPXXRGGXXXFXGGPGGGGGXXXXPXXGXGXXXXXGXXGXFXXFXXGGGGGGGX 526
G GG P GG F GGPGG GG G G G G F G GG GG
Sbjct: 225 GFGGGPG-GFEGGPGGFGGGPGGFGG-------GLG-----GFGGGPGGFGGGPGGHGGP 271
Query: 527 G 529
G
Sbjct: 272 G 272
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +2
Query: 377 RGGXXXFXGGPGGGGGXXXXPXXGXGXXXXXGXXGXFXXFXXGGGG-GGGXGG 532
RG GG GGG G P G G G G G GG GGG GG
Sbjct: 183 RGHNGGGFGGFGGGSG---GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.5 bits (73), Expect = 0.047
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +2
Query: 377 RGGXXXFXGGPGGGGGXXXXPXXGXGXXXXXGXXGXFXXFXXGGGGGGGXGG 532
RGG F GG GG GG G G G GG GG GG
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect(2) = 0.059
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -2
Query: 438 GXXXXPPPPPG--PPXKXXXPP 379
G PPPPPG PP + PP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.2 bits (55), Expect(2) = 0.059
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 522 PPPPPPPXXXXXKXPXXP 469
PPPPPPP P P
Sbjct: 10 PPPPPPPGFEPPSQPPPP 27
Score = 25.8 bits (54), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 531 PPXPPPPPPP 502
PP PPPPPP
Sbjct: 20 PPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 531 PPXPPPPPPP 502
P PPPPPPP
Sbjct: 21 PSQPPPPPPP 30
Score = 25.4 bits (53), Expect(2) = 0.059
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 531 PPXPPPPPPP 502
PP PPPPPP
Sbjct: 5 PPGNPPPPPP 14
Score = 25.4 bits (53), Expect(2) = 0.059
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 531 PPXPPPPPPP 502
P PPPPPPP
Sbjct: 6 PGNPPPPPPP 15
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.083
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = -2
Query: 522 PPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPPXKXXXPPLXXGG--GXPPS 349
PPPPPP P P P P PPP P PPL PP+
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPP-------PPPRSAPSTGRQPPPLSSSRAVSNPPA 390
Query: 348 P 346
P
Sbjct: 391 P 391
Score = 31.9 bits (69), Expect = 0.14
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -2
Query: 522 PPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPPXKXXXPPLXXG-GGXPPSP 346
PP P PP P P P P PP PP PPL G PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGA----PAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 31.1 bits (67), Expect = 0.25
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = -2
Query: 531 PPXPPPPPPPXXXXXKXPXXPXXXXXPXP-XXGXXXXPPPPPGPPXKXXXPPLXXGGGXP 355
PP PP PP P P P PP P G P PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 354 PSP 346
P+P
Sbjct: 480 PAP 482
Score = 30.3 bits (65), Expect = 0.44
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -2
Query: 522 PPPPPPP-XXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPPXKXXXPPLXXGGGXPPSP 346
PPPPPPP K P P PPPPP P G PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLP------PPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Frame = -2
Query: 528 PXPPP-PPPPXXXXXKXPXXPXXXXXP---XPXXGXXXXPPPPPGPPXKXXXPPLXXGGG 361
P PPP PPP P P P P PP PP P + L
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP-PSSRVSAAALAANKK 309
Query: 360 XPPSP 346
PP P
Sbjct: 310 RPPPP 314
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = -3
Query: 530 PPXPPPPXXPXXXXKKXXXPXXXXXXPXPXXGXXPXPPPPXXPXKKXXXPPXXXGGGPPX 351
PP PPPP P P PPP PP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLP------PPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Query: 350 PP 345
PP
Sbjct: 365 PP 366
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.3 bits (70), Expect = 0.11
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Frame = -2
Query: 528 PXPPPPPPPXXXXXKXPXXPXXXXXPXP-----XXGXXXXPPPPPGPPXKXXXPP 379
P PPPPPPP P P P G PPPP P + PP
Sbjct: 236 PAPPPPPPPTL----PPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/71 (26%), Positives = 19/71 (26%), Gaps = 9/71 (12%)
Frame = -2
Query: 531 PPXPPPPPPPXXXXXKXPXXP---------XXXXXPXPXXGXXXXPPPPPGPPXKXXXPP 379
PP PPPPPP P P P P P PP PP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Query: 378 LXXGGGXPPSP 346
P P
Sbjct: 249 QSTNTSQLPMP 259
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.44
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = -3
Query: 530 PPXPPPPXXPXXXXKKXXXPXXXXXXPXPXXGXXPXPPPPXXPXKKXXXPPXXXGGGPPX 351
PP PP P P P P P P P K P PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAP-PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPM 197
Query: 350 PP 345
PP
Sbjct: 198 PP 199
Score = 29.1 bits (62), Expect = 1.0
Identities = 17/62 (27%), Positives = 18/62 (29%), Gaps = 2/62 (3%)
Frame = -2
Query: 531 PPXP--PPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPPXKXXXPPLXXGGGX 358
PP P PPP P P P P PP P PP+
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 357 PP 352
PP
Sbjct: 204 PP 205
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/63 (26%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Frame = -2
Query: 531 PPXPP--PPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPPXKXXXPPLXXGGGX 358
PP P PP P P P P P PP PP P+
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSR 217
Query: 357 PPS 349
P S
Sbjct: 218 PSS 220
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -2
Query: 423 PPPPPGPPXKXXXPPLXXG 367
PPP P P PPL G
Sbjct: 8 PPPAPAPAAAAPAPPLMTG 26
Score = 22.6 bits (46), Expect(2) = 1.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 531 PPXPPPPPPP 502
P PPPPP P
Sbjct: 3 PAPPPPPPAP 12
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.5 bits (58), Expect = 3.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 528 PXPPPPPPPXXXXXKXPXXP 469
P PPPPPPP K P
Sbjct: 306 PPPPPPPPPSNDFWKDSNEP 325
Score = 26.2 bits (55), Expect = 7.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 531 PPXPPPPPP 505
PP PPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
Frame = -2
Query: 528 PXPPPPPP----PXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPPXKXXXPPLXXGGG 361
P PPPPPP P G PPPP PP PPL G
Sbjct: 905 PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPP-----PPLVSAAG 959
Score = 26.2 bits (55), Expect = 7.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 531 PPXPPPPPP 505
PP PPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 25.8 bits (54), Expect = 9.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 531 PPXPPPPPPP 502
P PPPPPPP
Sbjct: 942 PAFPPPPPPP 951
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 423 PPPPPGPP 400
PPPPP PP
Sbjct: 1095 PPPPPPPP 1102
Score = 22.2 bits (45), Expect(2) = 3.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 531 PPXPPPPPPP 502
P PPPPPP
Sbjct: 1091 PSAVPPPPPP 1100
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -2
Query: 531 PPXPPPPPPPXXXXXKXPXXPXXXXXPXPXXGXXXXPPPPPGPPXKXXXPPL 376
PP P P P P P P PP P GPP PPL
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA-----PPMPAGPP-SAPPPPL 1735
Score = 25.8 bits (54), Expect = 9.5
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = -2
Query: 447 PXXGXXXXPPPPPGPPXKXXXPPLXXGGGXPPSP 346
P PPPP P PP+ G P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 7.2
Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 2/68 (2%)
Frame = -2
Query: 531 PPXPPPPPPPXXXXXKXPXXPXXXXXPXPXX--GXXXXPPPPPGPPXKXXXPPLXXGGGX 358
PP P P P P P G PPPPPG P G
Sbjct: 252 PPLSIPNVLPFTAAQHFPGMPAMPMMNVPMGPGGAPLVPPPPPGMVMASPSPAAATIPGA 311
Query: 357 PPSPXXXF 334
P P F
Sbjct: 312 PVMPNIPF 319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,793,484
Number of Sequences: 5004
Number of extensions: 25893
Number of successful extensions: 349
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 513276802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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