Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P17
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0815 + 25458171-25458423,25458649-25458683                       37   0.025
05_07_0244 - 28625119-28625140,28625474-28625724                       34   0.18 
02_05_0458 + 29212123-29212403,29213748-29213772                       29   3.8  
08_02_0912 - 22536181-22537011                                         29   5.0  
12_02_0563 + 20509811-20510067,20511402-20511474                       28   8.8  
01_05_0813 + 25453692-25453973                                         28   8.8  

>01_05_0815 + 25458171-25458423,25458649-25458683
          Length = 95

 Score = 36.7 bits (81), Expect = 0.025
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +2

Query: 506 FDRVLKMYDKDEPEKWVDLKRQEMEYEKRRAHLISYYE-SVKHAQSVQWDDIPLPAIQVP 682
           F+R L +YD+D PE+W ++ R           L  YY+  V+  + ++   +P PA + P
Sbjct: 22  FERALAVYDRDTPERWHNIARAVAGKSADEVKL--YYDLLVEDVKRIETGKVPFPAYRCP 79

Query: 683 DTTL 694
              +
Sbjct: 80  QPAI 83


>05_07_0244 - 28625119-28625140,28625474-28625724
          Length = 90

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 506 FDRVLKMYDKDEPEKWVDLKRQEMEYEKRRAHLISYYESVKH-AQSVQWDDIPLPAIQVP 682
           F++ L +YDK+ P++W ++ R  +   K    +  YYE ++   + ++   +P PA + P
Sbjct: 17  FEQALAVYDKETPDRWHNIAR-AVGGGKSAEDVKRYYEMLEEDIKHIESGKVPFPAYRCP 75

Query: 683 DTTLY 697
               Y
Sbjct: 76  AAAGY 80


>02_05_0458 + 29212123-29212403,29213748-29213772
          Length = 101

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 506 FDRVLKMYDKDEPEKWVDLKR 568
           F+R L +YD+D P++W ++ R
Sbjct: 13  FERALAIYDRDTPDRWQNVAR 33


>08_02_0912 - 22536181-22537011
          Length = 276

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 575 MEYEKRRAHLISYYESVKHAQSVQWDDIPLPA 670
           +EYE  +AHL+S+ E  + A + Q  D P P+
Sbjct: 74  LEYEAEKAHLLSHGEVKETAPAEQVPDAPRPS 105


>12_02_0563 + 20509811-20510067,20511402-20511474
          Length = 109

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 506 FDRVLKMYDKDEPEKWVDLKR 568
           F+R L  YDKD P +W ++ R
Sbjct: 13  FERALATYDKDTPGRWQNVAR 33


>01_05_0813 + 25453692-25453973
          Length = 93

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 506 FDRVLKMYDKDEPEKWVDLKRQEMEYEKRRAHLISYYESVK 628
           F+R L +YD D P++W ++ R  M   K    +  +YE ++
Sbjct: 28  FERALAVYDTDAPDRWHNVARY-MGGAKSAEEVRRHYERLQ 67


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,591,287
Number of Sequences: 37544
Number of extensions: 316891
Number of successful extensions: 547
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)