Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P17
         (899 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023532-1|AAH23532.1|  641|Homo sapiens WW domain binding prote...   132   2e-30
BC001621-1|AAH01621.1|  641|Homo sapiens WW domain binding prote...   132   2e-30
AF118023-1|AAD30425.1|  641|Homo sapiens SH3 domain-binding prot...   132   2e-30
AB029309-1|BAA88410.1|  641|Homo sapiens Npw38-binding protein N...   132   2e-30
BC015354-1|AAH15354.1|  415|Homo sapiens NF-kappaB activating pr...    30   10.0 

>BC023532-1|AAH23532.1|  641|Homo sapiens WW domain binding protein
           11 protein.
          Length = 641

 Score =  132 bits (319), Expect = 2e-30
 Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
 Frame = +2

Query: 242 MGRRSINTTKSGKYMNPTDXXXXXXXXXXXXXXXXXXXMVRAAVLKMKDPVQILEELQKI 421
           MGRRS ++TKSGK+MNPTD                   MVRAAVLKMKDP QI+ +++K+
Sbjct: 1   MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL 60

Query: 422 DEMEFNVLQPSPXXXXXXXXXXXXXXXTFDRVLKMYDKDEPEKWVDLKRQEMEYEKRRAH 601
           DEMEFN +Q                  TF+R+L++Y+K+ P+ + +L++ E+EYE++RA 
Sbjct: 61  DEMEFNPVQQPQLNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKLEVEYEQKRAQ 120

Query: 602 LISYYESVKHAQSVQWDDIPLPAI-QVPDTTLYNTAP 709
           L  Y+++VK+AQ V+ + IPLP +   P   L    P
Sbjct: 121 LSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQDIP 157


>BC001621-1|AAH01621.1|  641|Homo sapiens WW domain binding protein
           11 protein.
          Length = 641

 Score =  132 bits (319), Expect = 2e-30
 Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
 Frame = +2

Query: 242 MGRRSINTTKSGKYMNPTDXXXXXXXXXXXXXXXXXXXMVRAAVLKMKDPVQILEELQKI 421
           MGRRS ++TKSGK+MNPTD                   MVRAAVLKMKDP QI+ +++K+
Sbjct: 1   MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL 60

Query: 422 DEMEFNVLQPSPXXXXXXXXXXXXXXXTFDRVLKMYDKDEPEKWVDLKRQEMEYEKRRAH 601
           DEMEFN +Q                  TF+R+L++Y+K+ P+ + +L++ E+EYE++RA 
Sbjct: 61  DEMEFNPVQQPQLNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKLEVEYEQKRAQ 120

Query: 602 LISYYESVKHAQSVQWDDIPLPAI-QVPDTTLYNTAP 709
           L  Y+++VK+AQ V+ + IPLP +   P   L    P
Sbjct: 121 LSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQDIP 157


>AF118023-1|AAD30425.1|  641|Homo sapiens SH3 domain-binding protein
           SNP70 protein.
          Length = 641

 Score =  132 bits (319), Expect = 2e-30
 Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
 Frame = +2

Query: 242 MGRRSINTTKSGKYMNPTDXXXXXXXXXXXXXXXXXXXMVRAAVLKMKDPVQILEELQKI 421
           MGRRS ++TKSGK+MNPTD                   MVRAAVLKMKDP QI+ +++K+
Sbjct: 1   MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL 60

Query: 422 DEMEFNVLQPSPXXXXXXXXXXXXXXXTFDRVLKMYDKDEPEKWVDLKRQEMEYEKRRAH 601
           DEMEFN +Q                  TF+R+L++Y+K+ P+ + +L++ E+EYE++RA 
Sbjct: 61  DEMEFNPVQQPQLNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKLEVEYEQKRAQ 120

Query: 602 LISYYESVKHAQSVQWDDIPLPAI-QVPDTTLYNTAP 709
           L  Y+++VK+AQ V+ + IPLP +   P   L    P
Sbjct: 121 LSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQDIP 157


>AB029309-1|BAA88410.1|  641|Homo sapiens Npw38-binding protein
           NpwBP protein.
          Length = 641

 Score =  132 bits (319), Expect = 2e-30
 Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
 Frame = +2

Query: 242 MGRRSINTTKSGKYMNPTDXXXXXXXXXXXXXXXXXXXMVRAAVLKMKDPVQILEELQKI 421
           MGRRS ++TKSGK+MNPTD                   MVRAAVLKMKDP QI+ +++K+
Sbjct: 1   MGRRSTSSTKSGKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKL 60

Query: 422 DEMEFNVLQPSPXXXXXXXXXXXXXXXTFDRVLKMYDKDEPEKWVDLKRQEMEYEKRRAH 601
           DEMEFN +Q                  TF+R+L++Y+K+ P+ + +L++ E+EYE++RA 
Sbjct: 61  DEMEFNPVQQPQLNEKVLKDKRKKLRETFERILRLYEKENPDIYKELRKLEVEYEQKRAQ 120

Query: 602 LISYYESVKHAQSVQWDDIPLPAI-QVPDTTLYNTAP 709
           L  Y+++VK+AQ V+ + IPLP +   P   L    P
Sbjct: 121 LSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQDIP 157


>BC015354-1|AAH15354.1|  415|Homo sapiens NF-kappaB activating
           protein protein.
          Length = 415

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 23/64 (35%), Positives = 29/64 (45%)
 Frame = +3

Query: 408 NYRKLMKWNSMYCSHLHLMKKY*KRKEKNSRKLLTESSKCMTKMSQRNG*ISNVKKWNMK 587
           N R+  K         H  KKY K++ K SRK   ESS   +K SQ    + N  K+  K
Sbjct: 228 NKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRK---ESSDSSSKESQEEF-LENPWKYRTK 283

Query: 588 RGEP 599
             EP
Sbjct: 284 AEEP 287


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,977,144
Number of Sequences: 237096
Number of extensions: 1931537
Number of successful extensions: 3454
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3446
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)