Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_P16
(951 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0904 + 20717005-20718087 34 0.19
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.58
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.3
01_01_0570 - 4231100-4232560 31 1.8
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.4
07_01_0479 + 3606663-3607448 30 3.1
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 29 4.1
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 29 5.4
12_02_1174 - 26696869-26698191 29 7.2
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 29 7.2
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 7.2
01_05_0490 + 22672241-22674679 29 7.2
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 28 9.5
02_05_0149 + 26290236-26290880 28 9.5
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 28 9.5
>04_03_0904 + 20717005-20718087
Length = 360
Score = 33.9 bits (74), Expect = 0.19
Identities = 28/117 (23%), Positives = 33/117 (28%), Gaps = 1/117 (0%)
Frame = +1
Query: 430 GXGGGXXGS-APXKXXPPPGXXXVXXWAPHXHGXRXXXXPXXXAXPPPXXXPKPGEKGVS 606
G GGG + P K P P PH H + P PP PKP +
Sbjct: 26 GYGGGYTPTPTPVKPAPKPEKPPKEHKPPHHHEPKPEKPPKEHK-PPAYTPPKPTPTPPT 84
Query: 607 XXXXXXXXXXXXXXXXXKGAETPXXPXXCXGFSPXXPPPXXXPPXXXAVPXKGSPXP 777
A TP P +P P P P P +P P
Sbjct: 85 YTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTP 141
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 32.3 bits (70), Expect = 0.58
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +2
Query: 542 PPXXXPPPPXXPXQSXXXXXXXXXXXXXXXXHFXPXAPXKGRKPPXXPXXVXVFPXXXPP 721
PP PPPP P P P +PP P V PP
Sbjct: 49 PPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPP 108
Query: 722 PGXXPP 739
P PP
Sbjct: 109 PPPPPP 114
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = -2
Query: 359 PPXPPPXPXTXFXXXFCFGXXPP-XXXGXPRGGXXXPPXGGPPXRGIXXXFXP 204
PP PPP P F FG PP P P PP G+ P
Sbjct: 55 PPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPP 107
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/91 (24%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +2
Query: 542 PPXXXPPPPXX--PXQSXXXXXXXXXXXXXXXXHFXPXAPXKGRKPPXXPXXVXVFPXXX 715
PP PPPP P S ++ P PP P + P
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPP 605
Query: 716 PPPGXXPPXRXXXXXRGXPXPXXXXKXXPXP 808
PPP P R P P P P
Sbjct: 606 PPPPPILPNRSVPPPPPPPPPLPNHSVLPPP 636
>01_01_0570 - 4231100-4232560
Length = 486
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 807 GXGXXXXXXXGXGXPLXXXXXRXGGXXPGGGXXXGKTXTXXGXXGGFRPFXGAXGXKCXX 628
G G G G GG GGG G G G F G G
Sbjct: 123 GGGVGAGFGSGGGVGAGGGLRGGGGVGAGGGGGFGGGAGGGGGIGAGGGFGGGAGAGGGV 182
Query: 627 GGGPRFWG 604
GGG RF G
Sbjct: 183 GGGGRFGG 190
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = +2
Query: 545 PXXXPPPPXXPXQSXXXXXXXXXXXXXXXXHFXPXAPXKGRKPPXXPXXVXVFPXXXPPP 724
P PPPP P + P P + PP P P PPP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Query: 725 G 727
G
Sbjct: 371 G 371
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/79 (25%), Positives = 20/79 (25%)
Frame = +2
Query: 542 PPXXXPPPPXXPXQSXXXXXXXXXXXXXXXXHFXPXAPXKGRKPPXXPXXVXVFPXXXPP 721
PP PPP P P P PP P V PP
Sbjct: 170 PPGQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPP 229
Query: 722 PGXXPPXRXXXXXRGXPXP 778
PG P G P P
Sbjct: 230 PGMRPGMPPPPFRPGMPPP 248
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Frame = +1
Query: 235 GGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGG--XGGXXXPXLIGQXTXXRRX 408
GG P GG PRG GG P+ G GGG G P R
Sbjct: 13 GGNPRGGGGGGPRG----CGGGGPRSGGGGGPRGGGGGGPRGSGSSKPRRGDGGLGCGRG 68
Query: 409 XYXXLXXGXGGGXXGS 456
L G GGG GS
Sbjct: 69 DDSDLGLGYGGGGSGS 84
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 442 GXXGSAPXKXXPPPGXXXVXXWAPHXHGXRXXXXPXXXAXPPPXXXPKPGEKG 600
G S P PP G P HG P PPP P PG +G
Sbjct: 43 GYPQSGPYPYPPPSGAVYPPQGYPSSHGV---YPPPQGPYPPPHQPPPPGYQG 92
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/107 (20%), Positives = 25/107 (23%)
Frame = +1
Query: 457 APXKXXPPPGXXXVXXWAPHXHGXRXXXXPXXXAXPPPXXXPKPGEKGVSXXXXXXXXXX 636
+P PPP PH P PPP P P + S
Sbjct: 120 SPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKP 179
Query: 637 XXXXXXXKGAETPXXPXXCXGFSPXXPPPXXXPPXXXAVPXKGSPXP 777
+ P P P P PP P P P
Sbjct: 180 QPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPP 226
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -1
Query: 738 GGXXPGGGXXXGKTXTXXGXXGGFRPFXGAXGXKCXXGGGPRFWG 604
GG P GG G G GF G G + GGGPR +G
Sbjct: 4 GGGNPRGGGGGGPRGFGGGGPRGF----GGGGPRGFGGGGPRGFG 44
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 638 FXPXAPXKGRKPPXXPXXVXVFPXXXPPPGXXPPXRXXXXXRGXP 772
F P P +PP V P PPPG PP + G P
Sbjct: 382 FPPPPPPPDTRPPFMAPGVNARPLPPPPPG-LPPAQMQMAPFGVP 425
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 9/75 (12%)
Frame = +2
Query: 542 PPXXXPPPPXXPXQSXXXXXXXXXXXXXXXXHF---------XPXAPXKGRKPPXXPXXV 694
PP PPPP P S H P + RKPP P
Sbjct: 603 PPRRPPPPPPPPPSSIFYNLFKKGGSKSRRIHSVAPPQPPPPPPPTTRRSRKPPQPPSRP 662
Query: 695 XVFPXXXPPPGXXPP 739
P PPP PP
Sbjct: 663 A--PPPPPPPQQQPP 675
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 28.3 bits (60), Expect = 9.5
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -2
Query: 359 PPXPPPXPXTXF--XXXFCFGXXPPXXXGXPRGGXXXPP 249
PP PPP T F FCF PP G G PP
Sbjct: 248 PPPPPPTTTTNFHDDQHFCFPSMPPFHAGV---GPPPPP 283
>02_05_0149 + 26290236-26290880
Length = 214
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = -1
Query: 777 GXGXPLXXXXXRXGGXXPGGGXXXGKTXTXXGXXGGFRPFXGAXGXKCXXGGGPRFWG 604
G G GG GGG G+ G GG G G GGG + G
Sbjct: 90 GFGFGYGGSRGEGGGGGGGGGGGSGRAYGFGGGYGGHPGGFGGGGGGGGGGGGRNYGG 147
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 672 PXPAXXLLXFFPXXPPPXXXPPQXXGXXXXGV 767
P P LL ++ PPP PP G GV
Sbjct: 113 PPPPPHLLHYYGHPPPPPPPPPPFKGDHYGGV 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,899,735
Number of Sequences: 37544
Number of extensions: 395712
Number of successful extensions: 1955
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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