Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_P16
(951 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 32 2.7
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 32 2.7
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 32 2.7
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 32 2.7
Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 31 4.7
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 31 4.7
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 31 4.7
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 31 4.7
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 31 4.7
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 31 4.7
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 31 4.7
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 31 4.7
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 31 4.7
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 31 4.7
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 32.3 bits (70), Expect = 2.7
Identities = 19/77 (24%), Positives = 22/77 (28%)
Frame = +2
Query: 542 PPXXXPPPPXXPXQSXXXXXXXXXXXXXXXXHFXPXAPXKGRKPPXXPXXVXVFPXXXPP 721
PP PPPP + + P P G PP P + P PP
Sbjct: 44 PPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPP 103
Query: 722 PGXXPPXRXXXXXRGXP 772
PP G P
Sbjct: 104 MSSMPPPPGMMFPPGMP 120
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 32.3 bits (70), Expect = 2.7
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = -2
Query: 443 PPPXPXXXXLXXXRLXXVFWPIXWGXX*PPXPPPXPXTXFXXXFCFGXXPPXXXGXPRGG 264
PPP P L P+ G PP PPP P G PP
Sbjct: 301 PPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPP--PLPPPSSAGPPPPPPPPPLPNS 358
Query: 263 XXXPPXGGPP 234
P GGPP
Sbjct: 359 PAPPNPGGPP 368
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 32.3 bits (70), Expect = 2.7
Identities = 19/77 (24%), Positives = 22/77 (28%)
Frame = +2
Query: 542 PPXXXPPPPXXPXQSXXXXXXXXXXXXXXXXHFXPXAPXKGRKPPXXPXXVXVFPXXXPP 721
PP PPPP + + P P G PP P + P PP
Sbjct: 44 PPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPP 103
Query: 722 PGXXPPXRXXXXXRGXP 772
PP G P
Sbjct: 104 MSSMPPPPGMMFPPGMP 120
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 32.3 bits (70), Expect = 2.7
Identities = 19/77 (24%), Positives = 22/77 (28%)
Frame = +2
Query: 542 PPXXXPPPPXXPXQSXXXXXXXXXXXXXXXXHFXPXAPXKGRKPPXXPXXVXVFPXXXPP 721
PP PPPP + + P P G PP P + P PP
Sbjct: 48 PPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPP 107
Query: 722 PGXXPPXRXXXXXRGXP 772
PP G P
Sbjct: 108 MSSMPPPPGMMFPPGMP 124
>Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase
nuclear targeting subunit protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 31.5 bits (68), Expect = 4.7
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = +1
Query: 226 PRXGGPPXGGXXXPPRGXPXXXGGXXPKQKXXXKXVXGKGGGXGGXXXPXLIGQXTXXRR 405
PR G P G P RG P GG P + G+GG P G
Sbjct: 673 PRGGDPFWDGPGDPMRGGP-MRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSG 731
Query: 406 XXYXXLXXGXGGGXXGSAPXKXXPPPG 486
G GGG G + PG
Sbjct: 732 GGPPNGRGGPGGGMVGGGGHRPHEGPG 758
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,141,406
Number of Sequences: 237096
Number of extensions: 2045907
Number of successful extensions: 7933
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6946
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12547615372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -