Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_P13
(935 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.19
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.43
07_03_1136 + 24218601-24218734,24218769-24219906 32 0.75
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572... 31 1.7
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 30 2.3
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.3
12_02_1174 - 26696869-26698191 30 3.0
08_02_0186 + 13965960-13966424 30 3.0
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 3.0
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 4.0
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 5.3
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 29 5.3
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 7.0
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.9 bits (74), Expect = 0.19
Identities = 20/47 (42%), Positives = 21/47 (44%)
Frame = -3
Query: 675 PPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGG 535
PP G PP G P PPP P GG G P PP P+GG
Sbjct: 348 PPAKGPPPPPPPKGPSPPPPPPP-------GGKKGGP--PPPPPKGG 385
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 760 PXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTP 873
P PPPPK PP G PP PP K P
Sbjct: 327 PPPPPPKAAPPPPPP--KGPPPPPPAKGPPPPPPPKGP 362
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 765 PPPPXKXXKXXPPXXGGGXPPP 830
PPPP K PP G PPP
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPP 367
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 760 PXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTP 873
P PPP K PP PP G PP P
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 32.7 bits (71), Expect = 0.43
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -3
Query: 675 PPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
PP PP G P PPP G GG G P P PR G
Sbjct: 354 PPAAPAAPRPPGPGPGPPPPPGAAG----RGGGGPPPPALPGGPRARG 397
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 765 PPPPXKXXKXXPPXXGGGXPPPXXXKXXGXXXP 863
PPPP PP G G PPP G P
Sbjct: 352 PPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGP 384
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.9 bits (69), Expect = 0.75
Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -3
Query: 681 GAP-PFLGXTNNPPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
GAP P G PP G PP P G GG GG PP P GGG
Sbjct: 96 GAPGPLGGGGARPPGGGGGGGPPSLPPGA----GGGGGA---RPPAPGGGG 139
>04_04_0201 - 23555336-23556008,23556097-23556258,23556353-23557206,
23557452-23557613,23558197-23558649,23559729-23559788,
23559983-23560058,23561546-23561593,23561948-23562022,
23562067-23562494
Length = 996
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3
Query: 684 SGAPPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGGXGG 571
S P LG +P G P PPP P+ G GG
Sbjct: 888 SNFPYSLGHAPSPALRGLPPPPPPPPSASALAVAGLGG 925
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 760 PXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTP 873
P PPP PP PP GAPPQ P
Sbjct: 48 PPPPPQMWGQAPPPPQPAYGQPPPAQAGYYGAPPQAAP 85
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +1
Query: 754 FXPXPPPPKXXXXKXPPFXGGXXPPXXLXXXXG--APPQKTPP 876
+ P PPPP+ PP PP G PPQ PP
Sbjct: 7 YAPHPPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPP 49
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 760 PXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTPP 876
P PPPP+ K P PP L PP T P
Sbjct: 160 PPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRP 198
>08_02_0186 + 13965960-13966424
Length = 154
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 532 PPPPGXGGXXXGXSPXSPXKKKXTCGXXGGGG 627
PPPP +P P CG GGGG
Sbjct: 70 PPPPSQPAGPSSHTPPCPPAAVVCCGGGGGGG 101
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 765 PPPPXKXXKXXPPXXGGGXPPPXXXKXXGXXXPKNXP 875
PPPP PP G PPP K PK P
Sbjct: 366 PPPPPPRPPPPPPPIKKGAPPPAPPKATMARFPKLSP 402
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 760 PXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTP 873
P PPPP PP PP GAPP P
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPP 390
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Frame = +1
Query: 760 PXPPPPKXXXXKXP----PFXGGXXPPXXLXXXXGAPPQKTPP 876
P PPPP P P GG PP PP+ PP
Sbjct: 280 PPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPP 322
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 648 PPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
PP G P PPP P G P PP P GG
Sbjct: 298 PPVGGTQPPPPPPPLA--------NGPPRSIPPPPMTGG 328
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = -3
Query: 675 PP--FLGXTNNPPFXGXXPXPPPXPTGXFFFXGGXGGXP----XXXPPXPRG 538
PP F G T P G PPP P G GG GG P PP P G
Sbjct: 1165 PPAGFRGGTPPPNAHGGVAPPPPPPRG----HGGVGGPPTPPGAPAPPMPPG 1212
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 760 PXPPPPKXXXX-KXPPFXGGXXPPXXLXXXXGAPPQKTPP 876
P PPPPK + PP PP PP+K PP
Sbjct: 191 PQPPPPKEEEKPEPPPAVIIVEPPAPAPEPEPEPPKKEPP 230
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 769 PPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTP 873
PPP PP G PP +PP TP
Sbjct: 25 PPPASNNSSSPPAPGSLSPPSLTPPAAPSPPSTTP 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,009,414
Number of Sequences: 37544
Number of extensions: 498187
Number of successful extensions: 3227
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2760
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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