SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P13
         (935 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical pr...    33   0.22 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    33   0.39 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    33   0.39 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    33   0.39 
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    31   0.90 
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    31   0.90 
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    31   1.2  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    31   1.2  
Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical pr...    31   1.6  
AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical ...    31   1.6  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    30   2.1  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    30   2.1  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    30   2.1  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    25   2.3  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    30   2.7  
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog...    29   3.6  
AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical...    29   3.6  
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro...    29   3.6  
Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical pr...    29   6.3  
Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical pr...    29   6.3  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    29   6.3  

>U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical
           protein K09H11.4 protein.
          Length = 630

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = -3

Query: 675 PPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRG 538
           PPF      P F G  P  P  PT  F   GG  G P   P    G
Sbjct: 395 PPFPAFPKFPSFGGFQPFQPDFPTRRFGGNGGFAGGPWNSPGGSAG 440


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
 Frame = -3

Query: 681 GAPPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGG-------XGGXPXXXPPXPRGG 535
           G PP       PP  G  P PPP P G     GG        GG P   PP P GG
Sbjct: 725 GPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779



 Score = 31.9 bits (69), Expect = 0.68
 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
 Frame = -3

Query: 681 GAPPFLGXTNNPPFX--GXXPXPPPXPTGXFFFXGGXGGXPXXXPP 550
           G PP  G    PP    G  P PPP P G F      GG P   PP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGF-----KGGPPPPPPP 790



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 799 PPFXGGXXPPXXLXXXXGAPPQKTPP 876
           PP  GG  PP  L    G PP   PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP 732



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/52 (34%), Positives = 18/52 (34%)
 Frame = +1

Query: 721 PXPKXXFXXXFFXPXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTPP 876
           P P          P PPPP       PP  GG  PP       G PP   PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGL---PPISGGPPPPP--PPPGGCPPPPPPP 775


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
 Frame = -3

Query: 681 GAPPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGG-------XGGXPXXXPPXPRGG 535
           G PP       PP  G  P PPP P G     GG        GG P   PP P GG
Sbjct: 725 GPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779



 Score = 31.9 bits (69), Expect = 0.68
 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
 Frame = -3

Query: 681 GAPPFLGXTNNPPFX--GXXPXPPPXPTGXFFFXGGXGGXPXXXPP 550
           G PP  G    PP    G  P PPP P G F      GG P   PP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGF-----KGGPPPPPPP 790



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 799 PPFXGGXXPPXXLXXXXGAPPQKTPP 876
           PP  GG  PP  L    G PP   PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP 732



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/52 (34%), Positives = 18/52 (34%)
 Frame = +1

Query: 721 PXPKXXFXXXFFXPXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTPP 876
           P P          P PPPP       PP  GG  PP       G PP   PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGL---PPISGGPPPPP--PPPGGCPPPPPPP 775


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
 Frame = -3

Query: 681 GAPPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGG-------XGGXPXXXPPXPRGG 535
           G PP       PP  G  P PPP P G     GG        GG P   PP P GG
Sbjct: 308 GPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362



 Score = 31.9 bits (69), Expect = 0.68
 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
 Frame = -3

Query: 681 GAPPFLGXTNNPPFX--GXXPXPPPXPTGXFFFXGGXGGXPXXXPP 550
           G PP  G    PP    G  P PPP P G F      GG P   PP
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGF-----KGGPPPPPPP 373



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 799 PPFXGGXXPPXXLXXXXGAPPQKTPP 876
           PP  GG  PP  L    G PP   PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPP 315



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/52 (34%), Positives = 18/52 (34%)
 Frame = +1

Query: 721 PXPKXXFXXXFFXPXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTPP 876
           P P          P PPPP       PP  GG  PP       G PP   PP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGL---PPISGGPPPPP--PPPGGCPPPPPPP 358


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
 Frame = -3

Query: 675 PPFLGXTNNPP---FXGXXPXPPPXPTGXFFFXGGXGGXPXXXPP 550
           PP  G T  PP     G  P PPP P G      G  G P   PP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322



 Score = 31.5 bits (68), Expect = 0.90
 Identities = 20/48 (41%), Positives = 20/48 (41%)
 Frame = -3

Query: 675 PPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
           PP  G T  PP  G    PPP P    F   G GG P   PP  R  G
Sbjct: 301 PPPPGRTPGPP--GMPGMPPPPPPSR-FGPPGMGGMPPPPPPGMRYPG 345


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
 Frame = -3

Query: 675 PPFLGXTNNPP---FXGXXPXPPPXPTGXFFFXGGXGGXPXXXPP 550
           PP  G T  PP     G  P PPP P G      G  G P   PP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332



 Score = 31.5 bits (68), Expect = 0.90
 Identities = 20/48 (41%), Positives = 20/48 (41%)
 Frame = -3

Query: 675 PPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
           PP  G T  PP  G    PPP P    F   G GG P   PP  R  G
Sbjct: 311 PPPPGRTPGPP--GMPGMPPPPPPSR-FGPPGMGGMPPPPPPGMRYPG 355


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -3

Query: 645 PFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
           P     P PPP P        G G  P   PP P G G
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661



 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 626 PPPPXXPQVXFFFXGDXGDXPXXXPPXPGGGG 531
           PPPP  P +     G     P   PP  G GG
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -3

Query: 645 PFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
           P     P PPP P        G G  P   PP P G G
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487



 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 626 PPPPXXPQVXFFFXGDXGDXPXXXPPXPGGGG 531
           PPPP  P +     G     P   PP  G GG
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488


>Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical
           protein F46B3.5 protein.
          Length = 946

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = -3

Query: 675 PPFLGXTNNPPFXGXXPXPPPXPTGXFFFXGGXGG 571
           P F+     P F    P PPP      F  GG GG
Sbjct: 705 PQFVAVAPQPQFVAVAPVPPPVAPAVAFAGGGGGG 739


>AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical
           protein T22D1.2 protein.
          Length = 302

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -3

Query: 648 PPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
           PP       PPP PTG      G G      PP P+G G
Sbjct: 34  PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 72



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -3

Query: 648 PPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
           PP       PPP PTG      G G      PP P+G G
Sbjct: 97  PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 135



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -3

Query: 648 PPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
           PP       PPP PTG      G G      PP P+G G
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 166



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -3

Query: 648 PPFXGXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRGGG 532
           PP       PPP PTG      G G      PP P+G G
Sbjct: 252 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 290


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +1

Query: 766 PPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTPP 876
           PPPP       PP  G   PP         PP+ +PP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308



 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 768 PPPXKXXKXXPPXXGGGXPPP 830
           PPP    K  PP  G G PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPP 257


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +1

Query: 766 PPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTPP 876
           PPPP       PP  G   PP         PP+ +PP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329



 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 768 PPPXKXXKXXPPXXGGGXPPP 830
           PPP    K  PP  G G PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPP 278


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +1

Query: 766 PPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPPQKTPP 876
           PPPP       PP  G   PP         PP+ +PP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314



 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 768 PPPXKXXKXXPPXXGGGXPPP 830
           PPP    K  PP  G G PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPP 263


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 24.6 bits (51), Expect(2) = 2.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 315  PPPPXGGXXPP 283
            PPPP GG  PP
Sbjct: 1603 PPPPNGGPPPP 1613



 Score = 23.8 bits (49), Expect(2) = 2.3
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -3

Query: 363  GGXPAXXNFFFXXGGXPPPPXGG 295
            GG P          G PPPP GG
Sbjct: 1557 GGLPPPHGGMNGWRGGPPPPRGG 1579


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 7/48 (14%)
 Frame = +1

Query: 754 FXPXPPPPKXXXXKXPPFXGGXXPPXXL-------XXXXGAPPQKTPP 876
           F P PP P       P F GG  PP  +           GAPP   PP
Sbjct: 73  FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120



 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 675 PPFLGXTNNPPFXGXXPXPPPXPTG 601
           PP +G    PP     P PPP P+G
Sbjct: 98  PPMMGGIPPPPPMFGAPPPPPPPSG 122


>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = -1

Query: 635 GXXPPPPXXPQVXFFFXGDXGDXPXXXPPXPGGGGXF 525
           G  PPPP  P     +    G      PP PGG G +
Sbjct: 408 GYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444


>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
           domain protein 1 protein.
          Length = 1346

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +1

Query: 760 PXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPP 861
           P PPPP       P   GG  PP  L      PP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803


>AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.12 protein.
          Length = 78

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 765 PPPPXKXXKXXPPXXGGGXPPP 830
           PPPP        P  GGG PPP
Sbjct: 34  PPPPPACAPPPAPACGGGAPPP 55


>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
           protein.
          Length = 1346

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +1

Query: 760 PXPPPPKXXXXKXPPFXGGXXPPXXLXXXXGAPP 861
           P PPPP       P   GG  PP  L      PP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803


>Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.3 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -3

Query: 636 GXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRG 538
           G  P  PP P G     GG G      PP PRG
Sbjct: 149 GPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181


>Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.2 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -3

Query: 636 GXXPXPPPXPTGXFFFXGGXGGXPXXXPPXPRG 538
           G  P  PP P G     GG G      PP PRG
Sbjct: 149 GPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -3

Query: 684 SGAPPFLGXTNNPPFXGXXPXPPPXPTG 601
           SGAPP       PP  G  P PPP P G
Sbjct: 573 SGAPP--PPPPPPPMLGGPPPPPPPPGG 598


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,871,260
Number of Sequences: 27780
Number of extensions: 282029
Number of successful extensions: 1871
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -