Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P12
         (929 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  
06_03_0804 + 24761974-24763196,24763674-24764019                       28   9.2  

>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 296 NESAN---ARGEAVCVLGALPLPRSLTRCAR 379
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0804 + 24761974-24763196,24763674-24764019
          Length = 522

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +2

Query: 659 ALRTSXXXXIPVXXFLPFGKAWRFLIAHAX*VSQFRVXGRSLQAGLCARTP 811
           A R +    +    FLP G++   ++A     +QF +    + + LCAR P
Sbjct: 349 AARWTFFFDVDEYIFLPDGRSLEAVLAELEPYTQFTIEQNPMSSRLCARNP 399


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,356,880
Number of Sequences: 37544
Number of extensions: 443549
Number of successful extensions: 1198
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)