Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_P10
(876 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 25 0.59
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 23 3.1
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 7.3
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 7.3
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 22 7.3
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 22 7.3
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 22 7.3
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 22 7.3
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 22 7.3
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 22 7.3
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 22 7.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 9.6
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 9.6
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +2
Query: 419 GFVLLMTIVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLVLVFAGL 571
GF++L+ + + LL+ I +V + + + V+F +V F+G+
Sbjct: 213 GFLVLLLVALTTLQLLIYIQVIVIGTKNTIETVAYSVIFILWHIVGTFSGI 263
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 305 YGNQLQCNWS 276
+G QL+CNWS
Sbjct: 12 FGLQLECNWS 21
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 7.3
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 223 WLPDHVHQCLQY 258
W PD ++C+QY
Sbjct: 70 WKPDASYKCMQY 81
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 7.3
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 223 WLPDHVHQCLQY 258
W PD ++C+QY
Sbjct: 70 WKPDASYKCMQY 81
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 7.3
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 223 WLPDHVHQCLQY 258
W PD ++C+QY
Sbjct: 70 WKPDASYKCMQY 81
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 7.3
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 223 WLPDHVHQCLQY 258
W PD ++C+QY
Sbjct: 70 WKPDASYKCMQY 81
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 7.3
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 223 WLPDHVHQCLQY 258
W PD ++C+QY
Sbjct: 70 WKPDASYKCMQY 81
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +1
Query: 202 EDWLLHPWLPDHVHQCLQYRAV 267
+ W P LP H +Q ++ + V
Sbjct: 289 DSWATQPVLPTHPYQIIKNKQV 310
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDY 59
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDY 59
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDY 135
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDY 211
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDY 287
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDY 363
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 494 PDQQRLIFAGKQLEDGRTLSDY 515
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 570 PDQQRLIFAGKQLEDGRTLSDY 591
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 646 PDQQRLIFAGKQLEDGRTLSDY 667
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDY 59
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 718 PDQGRLIHRSRTMDDNKLILAY 783
PDQ RLI + ++D + + Y
Sbjct: 10 PDQQRLIFAGKQLEDGRTLSDY 31
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 562 CWFSVPDNDHHDSGLNV 612
CW+ + H+++G NV
Sbjct: 1558 CWYHLRVTAHNNAGFNV 1574
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 486 TTQAMLTSN--HAAFMTIVIRSTNPTPLRRGDSEDCWAG 376
T+ + SN +++ + ++I+ T P P + +D W G
Sbjct: 431 TSTSSTNSNKPNSSDLNMLIKETMPLPRKLVRGQDVWLG 469
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,836
Number of Sequences: 336
Number of extensions: 4146
Number of successful extensions: 30
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -