Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P10
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1395 - 26255776-26256043,26256194-26256414,26256550-262567...    29   4.9  
06_01_0390 + 2802334-2802339,2802461-2802618,2802755-2802826,280...    29   4.9  
10_08_0791 - 20590744-20591211,20591379-20591439,20591525-205915...    29   6.5  
07_03_1176 + 24567720-24570932                                         28   8.5  

>07_03_1395 -
           26255776-26256043,26256194-26256414,26256550-26256786,
           26257476-26257776,26258027-26258106
          Length = 368

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 545 RLVLVFAGLVYLTMTITTPALMLHGLDIAVASYFITVYNTYARQLENE 688
           RL+L  AGL Y    +TT  ++ + + I VA      +  YA++  +E
Sbjct: 282 RLILTLAGLKYHNHRLTTVEIVYNVISITVAFLVAIGFTVYAKRALDE 329


>06_01_0390 +
           2802334-2802339,2802461-2802618,2802755-2802826,
           2802967-2803114,2803234-2803503,2803741-2803904,
           2804184-2804236,2804302-2804496,2804597-2804694,
           2804787-2804891
          Length = 422

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +2

Query: 215 FILG-YLTM-FTNVYNTGLLITLT-NYIGAGSHSFDRTTSFDSIDL 343
           FI G Y+ + F N  N+ L I LT NYI A S S   T +FD ID+
Sbjct: 75  FIYGSYIGLHFANENNSFLAIKLTVNYIIAASSSNIYTKTFDGIDV 120


>10_08_0791 -
           20590744-20591211,20591379-20591439,20591525-20591592,
           20592015-20592188,20592291-20592331,20592571-20592620,
           20593083-20593171,20593250-20593324,20593631-20593719,
           20593895-20593955,20594111-20594227,20594465-20594667,
           20594785-20594842,20594951-20595103
          Length = 568

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -1

Query: 510 PGRLLCSPTTQAMLTSNHAAFMTIVIRSTNPTPLRRGDS 394
           P RLL  PT Q  L +  A     V  +  PTP  R DS
Sbjct: 516 PTRLLIPPTKQRSLDAGRAEVRVDVDSTPTPTPPERHDS 554


>07_03_1176 + 24567720-24570932
          Length = 1070

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 131 WSFCQNLECFEFAQTVITFGVANGCRVTQNLK 36
           WS CQ+LE     + + + G+ NG     +LK
Sbjct: 333 WSACQSLEMINLGENLFSGGIPNGLVECSHLK 364


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,105,722
Number of Sequences: 37544
Number of extensions: 448411
Number of successful extensions: 1258
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)