Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P10
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical ...    31   1.4  
AL132862-1|CAB60529.2|  434|Caenorhabditis elegans Hypothetical ...    29   5.8  
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro...    28   7.6  

>AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.4 protein.
          Length = 356

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 580 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 666
           D+ H +SGL  TWLGH   ++   GV+++
Sbjct: 76  DDFHSESGLFATWLGHATVLVDLEGVKFV 104


>AL132862-1|CAB60529.2|  434|Caenorhabditis elegans Hypothetical
           protein Y73F8A.2 protein.
          Length = 434

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
 Frame = +2

Query: 506 PGNIKFYVLFAA-CRLVLVFAGLVYLTMT----ITTPALMLHGLDIAVASYFITVYNT-Y 667
           PGN +F+V+ A     +L+ A +  +T       T   + L  L  A A+    +  T Y
Sbjct: 8   PGNGEFHVIIALFIETILMSARIHDVTYQHIEDFTCDDIGLSSLSGAKATDLARILMTNY 67

Query: 668 ARQLENEP**IQARPENQIRDVSFIDLAQWTTTNSFWLINYFN 796
           +R    EP  ++   E  I+D+S I     T T  +W+   +N
Sbjct: 68  SRNALPEPAPVKVEVEITIQDISDISAITGTFTIDYWISAIWN 110


>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical protein
            F33C8.1b protein.
          Length = 1234

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +2

Query: 473  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 580
            +  VV   +  P N + F+V+FAAC +V LV AGL+++
Sbjct: 1124 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1161


>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical protein
            F33C8.1a protein.
          Length = 1271

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +2

Query: 473  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 580
            +  VV   +  P N + F+V+FAAC +V LV AGL+++
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1198


>Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical
           protein F17E5.2 protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 335 IDLKEFSEPTTTLQPAQQSSESPLLSG 415
           IDLK   E   T+QP + S   PL+ G
Sbjct: 23  IDLKNIGEHARTVQPFKTSKHQPLIQG 49


>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +2

Query: 473  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 580
            +  VV   +  P N + F+V+FAAC +V LV AGL+++
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,748,228
Number of Sequences: 27780
Number of extensions: 379750
Number of successful extensions: 1050
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)