Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P09
         (928 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   5.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   5.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   7.8  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 623 NFTNKAFFSXH 591
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 623 NFTNKAFFSXH 591
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 328 LQIFIKFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTL 203
           L IF   +E V      FL ++ GQG FN      N  L T+
Sbjct: 247 LVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLLTV 288



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 590 FSCGLSXLIXVXYHVW 543
           F C +S L  +  HVW
Sbjct: 279 FLCNMSLLTVIPIHVW 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,186
Number of Sequences: 336
Number of extensions: 2688
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)