Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P06
         (932 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   3.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   4.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.9  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   7.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   7.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   7.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   7.9  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.6 bits (41), Expect(2) = 3.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 455 LCRVDTDSCS 426
           LC ++TD CS
Sbjct: 102 LCNINTDDCS 111



 Score = 20.6 bits (41), Expect(2) = 3.0
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -1

Query: 323 CQVN*SDCFHKPC 285
           C +N  DC   PC
Sbjct: 103 CNINTDDCSPNPC 115


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
 Frame = +3

Query: 213 NKSNVDSQVKSILYNNVVS-------PKDERAWLMKAITLIDLTT---LSGDDTSSNVRR 362
           N  N+D+QVK  + N   S       P   RAW M   + I+ T    +SG   +  + +
Sbjct: 272 NDENIDAQVKYWMSNGAPSAKIVLGLPTFGRAWAMDDESDINGTPPLHISGPAEAGPLTK 331

Query: 363 LCRKAAYPIPIDIMNPSDNLHTAAVCVYPTKVPD 464
                +YP    ++N   N  T        +VPD
Sbjct: 332 DAGLLSYPEICTLLNDPQNAKTQK-AFQVKRVPD 364


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 85  CIKIIDITLNSRNKI*VKVSKST 153
           CI   DI  N +  I +K+S ST
Sbjct: 424 CIAKFDIVPNGKTVIPIKISPST 446


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 15/69 (21%), Positives = 34/69 (49%)
 Frame = -2

Query: 319 KSIRVIAFISHALSSLGDTTLLYNIDFT*ESTLLLFINVLSKGISSIVSKIARTISWISK 140
           KS+  +  I++    LGDT  ++N  F  +  L++F +   + +S++      TI+   +
Sbjct: 215 KSVEELMNIANYYRILGDTVEIFNSLFGYQIILVIF-DCCLETVSALNGAFLYTINGQGQ 273

Query: 139 LLLKFYFLN 113
             ++ +  N
Sbjct: 274 FNIEMFLCN 282


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -2

Query: 526 VATAATCMFFSNFIAFRAVHTSGTFVG 446
           ++  A C F++  +     HT+G  +G
Sbjct: 239 ISWQAVCTFYNILLCDSVAHTAGELLG 265


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 469 HTSGTFVG*TQTAAV*RLSEGFIISIGIGYAAFRQSL 359
           HT G F+    T  +  L  G++ +  +G+  FR+ L
Sbjct: 110 HTFGRFLAPNLTYLLVALYSGYVWTDILGFGYFREYL 146


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -2

Query: 526 VATAATCMFFSNFIAFRAVHTSGTFVG 446
           ++  A C F++  +     HT+G  +G
Sbjct: 239 ISWQAVCTFYNILLCDSVAHTAGELLG 265


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -2

Query: 526 VATAATCMFFSNFIAFRAVHTSGTFVG 446
           ++  A C F++  +     HT+G  +G
Sbjct: 559 ISWQAVCTFYNILLCDSVAHTAGELLG 585


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,814
Number of Sequences: 336
Number of extensions: 2377
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)