Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P06
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0151 + 5947177-5947322,5947461-5947607,5947707-5947931,594...    29   4.0  

>03_02_0151 +
           5947177-5947322,5947461-5947607,5947707-5947931,
           5948036-5948213,5948328-5948595,5948684-5948786,
           5948882-5949006,5949091-5949169,5949250-5949394,
           5949500-5949660,5949750-5949870,5950081-5950275
          Length = 630

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = -2

Query: 367 QSLLTFDDVSSPESVVKSIRVIAFISHALSSLGDTTLLYNIDFT*ESTLLLFINVLSKGI 188
           Q LL   D S+P   +KS++V  F   +LS++G +T++ N D      L  + +   KG 
Sbjct: 374 QELLDMVD-SAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLRAWYDSEGKGT 432

Query: 187 S 185
           S
Sbjct: 433 S 433


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,957,198
Number of Sequences: 37544
Number of extensions: 234004
Number of successful extensions: 534
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)