Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P06
         (932 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061335-1|AAL28883.1|  347|Drosophila melanogaster LD25963p pro...    98   2e-20
AE013599-1486|AAF58511.1|  347|Drosophila melanogaster CG8525-PA...    98   2e-20
BT011013-1|AAR30173.1|  290|Drosophila melanogaster SD14515p pro...    87   4e-17

>AY061335-1|AAL28883.1|  347|Drosophila melanogaster LD25963p
           protein.
          Length = 347

 Score = 97.9 bits (233), Expect = 2e-20
 Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 7/107 (6%)
 Frame = +3

Query: 264 VSPKDERAWLMKAITLIDLTTLSGDDTSSNVRRLCRKAAYPIPIDIMNP------SDNLH 425
           V+  +E AW ++A+ L DLTTL+GDDT++NVRRLC +A YP      +          +H
Sbjct: 44  VTGANEIAWALRALMLTDLTTLAGDDTAANVRRLCLRACYPFEPQFFDKFFDRALIPEMH 103

Query: 426 TAAVCVYPTKVPDVCTALKAM-KLEKNIQVAAVATGFPSGLYPLATR 563
           TAAVCVYP +V D   A++   KL+K + +AAVATGFP+G Y L TR
Sbjct: 104 TAAVCVYPARVKDAYLAIQQYDKLDK-VAIAAVATGFPTGQYGLQTR 149


>AE013599-1486|AAF58511.1|  347|Drosophila melanogaster CG8525-PA
           protein.
          Length = 347

 Score = 97.9 bits (233), Expect = 2e-20
 Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 7/107 (6%)
 Frame = +3

Query: 264 VSPKDERAWLMKAITLIDLTTLSGDDTSSNVRRLCRKAAYPIPIDIMNP------SDNLH 425
           V+  +E AW ++A+ L DLTTL+GDDT++NVRRLC +A YP      +          +H
Sbjct: 44  VTGANEIAWALRALMLTDLTTLAGDDTAANVRRLCLRACYPFEPQFFDKFFDRALIPEMH 103

Query: 426 TAAVCVYPTKVPDVCTALKAM-KLEKNIQVAAVATGFPSGLYPLATR 563
           TAAVCVYP +V D   A++   KL+K + +AAVATGFP+G Y L TR
Sbjct: 104 TAAVCVYPARVKDAYLAIQQYDKLDK-VAIAAVATGFPTGQYGLQTR 149


>BT011013-1|AAR30173.1|  290|Drosophila melanogaster SD14515p
           protein.
          Length = 290

 Score = 86.6 bits (205), Expect = 4e-17
 Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
 Frame = +3

Query: 309 LIDLTTLSGDDTSSNVRRLCRKAAYPIPIDIMNPS------DNLHTAAVCVYPTKVPDVC 470
           L DLTTL+GDDT++NVRRLC +A YP      +          +HTAAVCVYP +V D  
Sbjct: 2   LTDLTTLAGDDTAANVRRLCLRACYPFEPQFFDKFFDRALIPEMHTAAVCVYPARVKDAY 61

Query: 471 TALKAM-KLEKNIQVAAVATGFPSGLYPLATR 563
            A++   KL+K + +AAVATGFP+G Y L TR
Sbjct: 62  LAIQQYDKLDK-VAIAAVATGFPTGQYGLQTR 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,394,177
Number of Sequences: 53049
Number of extensions: 427746
Number of successful extensions: 984
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)