Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P04
         (969 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   8.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   8.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   8.2  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 182 LPEWMSAPHSTGTSI 226
           +P W++ PHS G ++
Sbjct: 4   VPGWLTPPHSLGNTV 18


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = -2

Query: 521 QQLKYQPSMSHGSCNRALGILLQQFPLVVDLLIPSCGSSNDMLQY 387
           Q + +   MSH       G      P  ++ L+P+  S  D+  Y
Sbjct: 344 QAMLHHNPMSHHLKQEPSGFTSSNHPFSINRLLPTAESKADIKMY 388


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 134 VVGNKLNFLFHKLYNCIF*KSLTVDF 57
           VV N L  L H  Y  +F   L VDF
Sbjct: 104 VVANVLFQLIHVYYTVVFTLLLGVDF 129


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 134 VVGNKLNFLFHKLYNCIF*KSLTVDF 57
           VV N L  L H  Y  +F   L VDF
Sbjct: 104 VVANVLFQLIHVYYTVVFTLLLGVDF 129


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 134 VVGNKLNFLFHKLYNCIF*KSLTVDF 57
           VV N L  L H  Y  +F   L VDF
Sbjct: 424 VVANVLFQLIHVYYTVVFTLLLGVDF 449


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,940
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27409745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)