Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_P01
         (889 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.60 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.60 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   7.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.8  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +3

Query: 297 MVRLYFLRSEVVVITLAIVIFLMYLQSI 380
           M++LY+L  +V+VI+  + +FL + + I
Sbjct: 216 MIQLYYLYFDVIVISTFLQLFLEHYEVI 243


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +3

Query: 297 MVRLYFLRSEVVVITLAIVIFLMYLQSI 380
           M++LY+L  +V+VI+  + +FL + + I
Sbjct: 142 MIQLYYLYFDVIVISTFLQLFLEHYEVI 169


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -3

Query: 764 FLFRCILLNNFSRYIRYFT----FFESVKFNNFVVKILYKMVLGIVSSKLSA 621
           F+ R   + N   +IR       +FES+   +   +I  ++VLG+V  +L A
Sbjct: 362 FVLRLYGIENLQAFIRKHVELAHYFESLVRGDERFEITEEVVLGLVCFRLKA 413


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 743 LNNFSRYIRYFTFFESVKFNNFVVKILYKMVLGIVSSKL 627
           L NF+    YF   ++  F  FV  ++Y  V     S+L
Sbjct: 25  LVNFNHRESYFRLSKAKSFCTFVAALVYCSVTFFALSEL 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,052
Number of Sequences: 336
Number of extensions: 3392
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)