Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_O19
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018     43   4e-04
01_06_1294 - 36076524-36076554,36076821-36076891,36077221-360772...    41   0.002
07_03_1509 - 27246721-27247350                                         30   2.2  
03_03_0233 - 15656930-15656998,15657459-15657591,15657677-156577...    29   6.7  

>05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018
          Length = 113

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 28/61 (45%), Positives = 36/61 (59%)
 Frame = +3

Query: 201 DLKGLQTKTLQVCPXNLSTRKLSDTLNMRKRAMELLKVSKDKRALKFLKRRIGHTHPRQE 380
           D KG  TK +     NL  R+++      KR  ELLKV KDKRALK  KR++G TH R +
Sbjct: 31  DRKGKSTKRVTFV-RNL-IREVAGFAPYEKRITELLKVGKDKRALKVAKRKLG-THKRAK 87

Query: 381 E 383
           +
Sbjct: 88  K 88



 Score = 35.5 bits (78), Expect = 0.058
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = +1

Query: 352 ELGTHIRAKRKREELSNVLAQMR 420
           +LGTH RAK+KREE++ VL +MR
Sbjct: 79  KLGTHKRAKKKREEMAGVLRKMR 101


>01_06_1294 -
           36076524-36076554,36076821-36076891,36077221-36077275,
           36077363-36077562,36078614-36078715
          Length = 152

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 26/61 (42%), Positives = 34/61 (55%)
 Frame = +3

Query: 201 DLKGLQTKTLQVCPXNLSTRKLSDTLNMRKRAMELLKVSKDKRALKFLKRRIGHTHPRQE 380
           D KG  TK +      +  R++       KR  ELLKV KDKRALK  KR++G TH R +
Sbjct: 31  DRKGKSTKRVNFVRGLI--REVVGFAPYEKRITELLKVGKDKRALKVAKRKLG-THKRAK 87

Query: 381 E 383
           +
Sbjct: 88  K 88



 Score = 34.7 bits (76), Expect = 0.10
 Identities = 14/23 (60%), Positives = 20/23 (86%)
 Frame = +1

Query: 352 ELGTHIRAKRKREELSNVLAQMR 420
           +LGTH RAK+KREE++ V+ +MR
Sbjct: 79  KLGTHKRAKKKREEMAGVIRKMR 101


>07_03_1509 - 27246721-27247350
          Length = 209

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 22/72 (30%), Positives = 34/72 (47%)
 Frame = -2

Query: 459 HLMVMVMSLGGCLPHLSEHVAKFFTLPLGADVCAQFVASRTSEHACLLTP*VTP*PSFSY 280
           HL  + +SL  C P  S  + +    P G  V +  VA+ +S  AC  +  VTP  +F  
Sbjct: 63  HLPTVALSLPRCRP-ASSRLCRLARAPAGRAVASSSVAATSSTPACPPSREVTPGATFP- 120

Query: 279 *ACPTTFAYLNS 244
              P+ F +L +
Sbjct: 121 ---PSPFHFLRA 129


>03_03_0233 -
           15656930-15656998,15657459-15657591,15657677-15657729,
           15658640-15658690,15658790-15658859,15659009-15659223,
           15660465-15660570,15660686-15660753,15660861-15661148,
           15661253-15661408,15661450-15661544,15661632-15661788
          Length = 486

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = +3

Query: 33  ASXHTFAFSSDS-VSPKSWLLXFANRSRPATKATKQLKSSAGRKGSHKXKPSELGQLDLK 209
           AS   + F  DS + P S  L  A+ S P++ + + +K S           S   +  + 
Sbjct: 288 ASVDMYNFLLDSGMDPVSADLPAASSSSPSSSSAQLMKYSTYLSSQAADSGSNTIEGIMN 347

Query: 210 GLQTKTLQVCPXNLSTRKLSD 272
           G+  + L++ P NL  ++LSD
Sbjct: 348 GVIKEKLKIIPNNLKWQELSD 368


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,500,038
Number of Sequences: 37544
Number of extensions: 225987
Number of successful extensions: 438
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)