Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_O16
(1005 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p... 32 2.9
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein. 32 2.9
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein. 32 2.9
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 32 3.8
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 32 3.8
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 32 3.8
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 32 3.8
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 32 3.8
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 5.0
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 31 5.0
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 31 5.0
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 5.0
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 31 5.0
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 5.0
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 31 5.0
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 31 5.0
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 5.0
AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein pr... 31 5.0
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 31 5.0
AB067514-1|BAB67820.2| 1325|Homo sapiens KIAA1927 protein protein. 31 5.0
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 31 5.0
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 31 6.6
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 31 6.6
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 31 6.6
AK025429-1|BAB15128.1| 274|Homo sapiens protein ( Homo sapiens ... 31 8.7
AF279145-1|AAK52094.1| 564|Homo sapiens tumor endothelial marke... 31 8.7
AC112230-1|AAX88860.1| 329|Homo sapiens unknown protein. 31 8.7
>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
protein.
Length = 2715
Score = 32.3 bits (70), Expect = 2.9
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +2
Query: 707 LXPXPXXPPFXXPXPGPFPXXXXSTPPPPLC 799
L P P PP P P P P S PPPPLC
Sbjct: 401 LPPPPLTPPAPSPPP-PLPPPSTS-PPPPLC 429
>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
Length = 2605
Score = 32.3 bits (70), Expect = 2.9
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +2
Query: 707 LXPXPXXPPFXXPXPGPFPXXXXSTPPPPLC 799
L P P PP P P P P S PPPPLC
Sbjct: 291 LPPPPLTPPAPSPPP-PLPPPSTS-PPPPLC 319
>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
Length = 2415
Score = 32.3 bits (70), Expect = 2.9
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +2
Query: 707 LXPXPXXPPFXXPXPGPFPXXXXSTPPPPLC 799
L P P PP P P P P S PPPPLC
Sbjct: 101 LPPPPLTPPAPSPPP-PLPPPSTS-PPPPLC 129
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 692 PVFSPLXPXPXXP-PFXXPXPGPFPXXXXSTPPPP 793
P PL P P P P P PGP P PPPP
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGP-PPPQQGPPPPP 320
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 692 PVFSPLXPXPXXP-PFXXPXPGPFPXXXXSTPPPP 793
P PL P P P P P PGP P PPPP
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGP-PPPQQGPPPPP 320
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 31.9 bits (69), Expect = 3.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 692 PVFSPLXPXPXXP-PFXXPXPGPFPXXXXSTPPPP 793
P PL P P P P P PGP P PPPP
Sbjct: 214 PPLGPLPPGPPPPVPGYGPPPGP-PPPQQGPPPPP 247
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.9 bits (69), Expect = 3.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 692 PVFSPLXPXPXXP-PFXXPXPGPFPXXXXSTPPPP 793
P PL P P P P P PGP P PPPP
Sbjct: 324 PPLGPLPPGPPPPVPGYGPPPGP-PPPQQGPPPPP 357
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 692 PVFSPLXPXPXXP-PFXXPXPGPFPXXXXSTPPPP 793
P PL P P P P P PGP P PPPP
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGP-PPPQQGPPPPP 320
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 31.5 bits (68), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 704 PLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
P P P PP P P P P PPPP
Sbjct: 74 PQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.5 bits (68), Expect = 5.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
PV L P PP P PG P PPPP
Sbjct: 690 PVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 723
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.5 bits (68), Expect = 5.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
PV L P PP P PG P PPPP
Sbjct: 690 PVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 723
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.5 bits (68), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 704 PLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
P P P PP P P P P PPPP
Sbjct: 74 PQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 31.5 bits (68), Expect = 5.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
PV L P PP P PG P PPPP
Sbjct: 690 PVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 723
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 31.5 bits (68), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 704 PLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
P P P PP P P P P PPPP
Sbjct: 74 PQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.5 bits (68), Expect = 5.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
PV L P PP P PG P PPPP
Sbjct: 690 PVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 723
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 31.5 bits (68), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 704 PLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
P P P PP P P P P PPPP
Sbjct: 1 PQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 30
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.5 bits (68), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 704 PLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
P P P PP P P P P PPPP
Sbjct: 74 PQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103
>AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein
protein.
Length = 667
Score = 31.5 bits (68), Expect = 5.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
PV L P PP P PG P PPPP
Sbjct: 501 PVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 534
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
protein rA4 protein.
Length = 1157
Score = 31.5 bits (68), Expect = 5.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
PV L P PP P PG P PPPP
Sbjct: 700 PVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 733
>AB067514-1|BAB67820.2| 1325|Homo sapiens KIAA1927 protein protein.
Length = 1325
Score = 31.5 bits (68), Expect = 5.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPPL 796
P P P P PP P P P P S P PL
Sbjct: 1 PALRPFPPLPSLPPSLSPPPPPPPPAPASAPRGPL 35
>AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein.
Length = 929
Score = 31.5 bits (68), Expect = 5.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPP 793
PV L P PP P PG P PPPP
Sbjct: 494 PVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 527
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 6.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPPL 796
P+ SP P P P P P P P PPPP+
Sbjct: 305 PLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPV 339
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 6.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPPL 796
P+ SP P P P P P P P PPPP+
Sbjct: 305 PLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPV 339
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 31.1 bits (67), Expect = 6.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXPGPFPXXXXSTPPPPL 796
P+ SP P P P P P P P PPPP+
Sbjct: 305 PLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPV 339
>AK025429-1|BAB15128.1| 274|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21776 fis, clone HEP00171. ).
Length = 274
Score = 30.7 bits (66), Expect = 8.7
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXP-GPFPXXXXSTPPPP 793
P+++P P P PP P P P + PPPP
Sbjct: 220 PIYTPPPPAPHCPPPPPSAPTPPIPSPPSTLPPPP 254
>AF279145-1|AAK52094.1| 564|Homo sapiens tumor endothelial marker 8
precursor protein.
Length = 564
Score = 30.7 bits (66), Expect = 8.7
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXP-GPFPXXXXSTPPPP 793
P+++P P P PP P P P + PPPP
Sbjct: 510 PIYTPPPPAPHCPPPPPSAPTPPIPSPPSTLPPPP 544
>AC112230-1|AAX88860.1| 329|Homo sapiens unknown protein.
Length = 329
Score = 30.7 bits (66), Expect = 8.7
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 692 PVFSPLXPXPXXPPFXXPXP-GPFPXXXXSTPPPP 793
P+++P P P PP P P P + PPPP
Sbjct: 275 PIYTPPPPAPHCPPPPPSAPTPPIPSPPSTLPPPP 309
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,839,774
Number of Sequences: 237096
Number of extensions: 1193176
Number of successful extensions: 7733
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6386
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13433848218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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