Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_O12
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0969 - 9765114-9765664,9767963-9768512,9769507-9769561,976...    30   2.9  
01_01_0663 - 5059881-5060119,5060682-5060898,5061008-5061838,506...    29   3.8  
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902...    29   5.1  
09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800     28   8.9  

>12_01_0969 -
           9765114-9765664,9767963-9768512,9769507-9769561,
           9769918-9769980,9770547-9771325
          Length = 665

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 539 HYRRSHDCNTGFDFIHHCSYWKDHEY 616
           HY  S  C TG++  H+ +YW++  +
Sbjct: 341 HYEISSYCKTGYECKHNVTYWQNRSF 366


>01_01_0663 -
           5059881-5060119,5060682-5060898,5061008-5061838,
           5063560-5064120
          Length = 615

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 297 LLVYKVATLCTKNCMRLIMRAV 232
           LL+  VA LC K+CM+L+ R +
Sbjct: 203 LLILSVANLCNKSCMKLLERCL 224


>01_01_1139 -
           9024609-9024708,9024832-9024910,9025083-9025252,
           9025339-9025451,9025518-9025586,9025867-9025944,
           9026022-9026084,9026590-9026670,9027166-9027222,
           9027352-9027705
          Length = 387

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +3

Query: 261 FLYKVSPLYTLVAYVAVGLFCYSILFVVFISVSCLVLREPIYGGCIASSLVSALMNFIFN 440
           FLYK+  +  +V Y AV LF Y +  V +  +  L LR  +  G   S++    MN +  
Sbjct: 186 FLYKLLKVIRIVPYSAVQLFSYEVYKVTY-PLDVLRLRLAVQSG--HSTMSQVAMNML-R 241

Query: 441 TQGLTT 458
            +GL +
Sbjct: 242 DEGLAS 247


>09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800
          Length = 863

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 526 NLVRDHLSIVLYKYTAVREKNNDVVK 449
           N VRD ++++ Y+YT  R+ N ++ K
Sbjct: 436 NAVRDGMNLIPYEYTVCRQGNEEIDK 461


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,898,358
Number of Sequences: 37544
Number of extensions: 331237
Number of successful extensions: 758
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)