Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_O08
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              30   0.032
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              24   2.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 29.9 bits (64), Expect = 0.032
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 132 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLRLQYSK-GIYTPFSVTST 296
           +DT+   K KI  K  I PD + L+   KQ E G TL+  + S  G+   F V +T
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ-ETGVTLVVQEISSDGLKFAFDVKTT 786


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 142 IVSEASTSKVMVFPVRVFTKICMPPRRRKYRDKI 41
           ++    T+K++   VRV   I + PRRRK+   I
Sbjct: 19  VIPAELTAKLLGNCVRVSPVITIEPRRRKFHKPI 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,983
Number of Sequences: 438
Number of extensions: 3574
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)