Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_O04
         (957 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118420-1|AAM48449.1|  250|Drosophila melanogaster RE74758p pro...    29   7.1  
AE014296-1850|AAF50135.2|  250|Drosophila melanogaster CG12523-P...    29   7.1  
AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA...    29   9.4  

>AY118420-1|AAM48449.1|  250|Drosophila melanogaster RE74758p
           protein.
          Length = 250

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = -2

Query: 845 PEGXKGGXSXFGLXGGVWXKGCPXXGAXHGGXGGG 741
           P G  GG    G  G  W  G    G  HGG GGG
Sbjct: 77  PAGGSGGWQSGGGGGSGWTAG---GGGGHGGGGGG 108


>AE014296-1850|AAF50135.2|  250|Drosophila melanogaster CG12523-PA
           protein.
          Length = 250

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = -2

Query: 845 PEGXKGGXSXFGLXGGVWXKGCPXXGAXHGGXGGG 741
           P G  GG    G  G  W  G    G  HGG GGG
Sbjct: 77  PAGGSGGWQSGGGGGSGWTAG---GGGGHGGGGGG 108


>AE014297-116|AAF52115.2|  559|Drosophila melanogaster CG12586-PA
           protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 24/71 (33%), Positives = 26/71 (36%)
 Frame = -2

Query: 953 GGVLGPXPPGXXGGXXPPXXGXRXGGXF*EXXPRXXPEGXKGGXSXFGLXGGVWXKGCPX 774
           GG +GP  PG  GG   P      GG      P     G  GG +  G  GG    G P 
Sbjct: 392 GGPMGPGGPGGPGGPGGPGGPGGPGGPGMPWGP--GGPGGPGGPNGPGGPGGPGGPGGP- 448

Query: 773 XGAXHGGXGGG 741
            G   G  G G
Sbjct: 449 -GGPGGPCGPG 458


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,822,425
Number of Sequences: 53049
Number of extensions: 436132
Number of successful extensions: 1751
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1653
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)