Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N22
         (832 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0051 + 11902322-11903125                                         31   1.1  
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703...    31   1.1  
01_03_0282 - 14580875-14580891,14582126-14585855                       31   1.1  
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716...    31   1.1  
08_01_0722 + 6412654-6412860,6413142-6413687,6413745-6413877,641...    29   4.5  
05_03_0259 - 11161447-11161706,11161764-11164266                       29   6.0  
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731...    29   6.0  

>09_03_0051 + 11902322-11903125
          Length = 267

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -3

Query: 290 FTLWTSPAVAFYKFYPEI*VAEPAINTPRQ*QP 192
           F++++ P+ +FY F+P+   AEP   TPR+  P
Sbjct: 69  FSIFSFPSASFYAFHPD--AAEPRTPTPRKRSP 99


>04_04_1358 +
           32869222-32869306,32869947-32870008,32870301-32870393,
           32870640-32870761,32873139-32873167,32873586-32873891,
           32873977-32874035,32874148-32874279,32874414-32874455,
           32874560-32875093,32875189-32875379,32875538-32876027,
           32876273-32876335,32876704-32876805,32876895-32877215,
           32877294-32877386,32877484-32877585,32877718-32877822,
           32877933-32878066,32878429-32878612,32879226-32879357,
           32879447-32879559,32879628-32879709,32880328-32881992
          Length = 1746

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +3

Query: 309 EDGDYNKPIVNNVEETPKTPKV-FQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYD 485
           ED D N  ++N +EE+  T +    + +  +  C++ ++   L    L     M  K YD
Sbjct: 670 EDSDSNCSVINGMEESENTKETDISKLMSEDDFCRLKDLGAGLHQKSLEELTMMAHKFYD 729

Query: 486 E 488
           +
Sbjct: 730 D 730


>01_03_0282 - 14580875-14580891,14582126-14585855
          Length = 1248

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 297 YIVHTLDKSSCCVL*ILPRNLSCRTSN*HATT 202
           Y + TLD S CC L  LP+N+   TS  H  T
Sbjct: 623 YNLQTLDLSDCCSLRCLPKNMKYMTSLRHLYT 654


>01_01_0908 +
           7158172-7158356,7159436-7159866,7159953-7161061,
           7161372-7162820
          Length = 1057

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
 Frame = +3

Query: 336 VNNVEETPKTPK----VFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDEEIENY 503
           VN  ++ P TPK    V +R    NG  +   + +Q  +T+  N  PM+ K+ D+  E  
Sbjct: 244 VNGADQPPSTPKLSEVVLKRNEDENGKTEETLVAEQCNLTKDPN--PMSGKERDQVAEQC 301

Query: 504 RLQL-------EKAYKLCS-PCKRVVQXKLNXEK 581
            L         +K  ++C+ PC+ VV  + +  K
Sbjct: 302 NLTKDPKPVSGQKCEQICNEPCEEVVLKRSSKSK 335


>08_01_0722 +
           6412654-6412860,6413142-6413687,6413745-6413877,
           6413917-6414035,6414128-6414883,6415209-6415258,
           6415560-6416679
          Length = 976

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
 Frame = +3

Query: 270 WTCPKCEQYNGFTEDGDY-NKPIVNNVEETP-KTPKVFQRTLPNNGLCKMCNINQQLKVT 443
           W  P+   Y G   +G++ N+P + ++   P KT     + L  N      N   ++++ 
Sbjct: 206 WNQPR-PYYQGDNNNGNFSNQPSLKDLVFAPAKTTDALSKKLAANDKLSF-NKMIEIQLA 263

Query: 444 QLANFVPMNEKKY-----DEEIENYR 506
           QLA+ VP NE +      D  IEN +
Sbjct: 264 QLASLVPANETRRIPGQPDSSIENVK 289


>05_03_0259 - 11161447-11161706,11161764-11164266
          Length = 920

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
 Frame = +3

Query: 297 NGFTEDG--DYNKPIVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMN 470
           NG+ + G  D    + N + +      +F      NGLCK+  + +  KV Q    V M 
Sbjct: 332 NGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMR 391

Query: 471 EKKYDEE--IENYRLQ--LEKAYKLC 536
             KY     I+ Y  +  + KA+++C
Sbjct: 392 PDKYSYNTLIDGYCREGSMRKAFEMC 417


>01_06_1123 +
           34671365-34671883,34672366-34672625,34673045-34673143,
           34673237-34675178,34675588-34675658,34676158-34676307,
           34676963-34677038,34677131-34677232,34677707-34677855,
           34678214-34678364
          Length = 1172

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 219 CWFCNSNFWVKFIERNSWTCPKCEQYN 299
           C  CN +   K +    W CP+C  YN
Sbjct: 272 CLECNEHRPKKMLTGGEWECPQCVYYN 298


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,116,296
Number of Sequences: 37544
Number of extensions: 281350
Number of successful extensions: 611
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)