Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N22
         (832 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   3.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.6  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 327 KPIVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDEEIENYR 506
           +P     ++  K   V  RT+  N +C +C    +++      +VP+ E  Y   I N +
Sbjct: 332 EPTEREEQQMQKEAAVMARTMNLNQVC-LCFRAYRVE-PGTGRWVPICEPVYSNPINNMK 389

Query: 507 LQLEKAYKLC 536
             L    K+C
Sbjct: 390 SALTGELKIC 399


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 477  KYDEEIENYRLQLEKAYKLCSPCKRVVQXKLNXEKE 584
            K  EE+E  +L +EKA++  S  K+ +      E E
Sbjct: 967  KLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAE 1002


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,774
Number of Sequences: 2352
Number of extensions: 12404
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)