Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_N22
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49912-1|CAA90140.1| 588|Caenorhabditis elegans Hypothetical pr... 122 4e-28
AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical... 29 3.1
Z77656-1|CAB01141.2| 350|Caenorhabditis elegans Hypothetical pr... 29 5.4
U80838-7|AAC71112.3| 581|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical... 29 5.4
Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical p... 28 7.1
U00052-4|AAK21419.2| 438|Caenorhabditis elegans Hypothetical pr... 28 7.1
DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like... 28 7.1
AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z49912-1|CAA90140.1| 588|Caenorhabditis elegans Hypothetical
protein T24F1.2 protein.
Length = 588
Score = 122 bits (293), Expect = 4e-28
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 20/168 (11%)
Frame = +3
Query: 141 ITSAMCITLIFKLIYN-LRLLLSWRVNCWFCNSNFWVKFIERNSWTCPKCEQYNGFTEDG 317
+ +A+ + ++Y +R + V CWFC + V++ +RNS+TCP CEQYNGFTEDG
Sbjct: 3 VAAAVGVIASVPILYKAIRPRIKTSVECWFCRKSTKVEYQQRNSFTCPSCEQYNGFTEDG 62
Query: 318 DYNKPIVNNVEETPK---TPKVFQRTLP----------------NNGLCKMCNINQQLKV 440
DYN+ I TPK P Q P +NGLC CN+ Q++ +
Sbjct: 63 DYNRRIPGQAWTTPKRYCEPGKMQSEKPSTFLDRFGGVNMSPKASNGLCSECNLGQEIIM 122
Query: 441 TQLANFVPMNEKKYDEEIENYRLQLEKAYKLCSPCKRVVQXKLNXEKE 584
++A F P++E +++EE+E+YR +LE+ Y+LC C V KL +K+
Sbjct: 123 NKVAEFEPIDEDRWNEELEDYRYKLERMYQLCPRCTIQVHGKLEEDKK 170
>AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical
protein Y37A1B.12 protein.
Length = 335
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/62 (24%), Positives = 41/62 (66%)
Frame = +3
Query: 309 EDGDYNKPIVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDE 488
+DG++ + +++++E P++ KVF ++G CK + +L+++++ F +EK++++
Sbjct: 280 KDGEFMQRVLDSLEFFPESSKVFS----SSG-CKRVDAKTELEISKM-GFSLNSEKEFND 333
Query: 489 EI 494
E+
Sbjct: 334 EL 335
>Z77656-1|CAB01141.2| 350|Caenorhabditis elegans Hypothetical
protein F07B10.2 protein.
Length = 350
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = -2
Query: 537 CIIYMLFLTVTCNSQFLHHISSHSLVQNWQVVSPLTAGLCYTFCTSHC*VVSFEIPLGFL 358
CI M + V Q L HI +L + L+ G+ T++C + L L
Sbjct: 51 CIFTMFYSFVEIMLQPLIHIYDDTLFLIHRKRFDLSKGITRLIPTTYCWCYAMSFSLFAL 110
Query: 357 EFLQHY*L*AYCNPH 313
+FL Y A C PH
Sbjct: 111 QFLYRY--VAVCKPH 123
>U80838-7|AAC71112.3| 581|Caenorhabditis elegans Hypothetical
protein F47F6.3 protein.
Length = 581
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 465 MNEKKYDEEIENYRLQLEKAYKLCSPCK 548
+N KK DE+++N + + E A + C C+
Sbjct: 499 LNRKKADEDVKNVKKRFEIAGRQCKKCR 526
>AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical
protein Y37A1B.13 protein.
Length = 412
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/62 (22%), Positives = 40/62 (64%)
Frame = +3
Query: 309 EDGDYNKPIVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDE 488
+DG++ + +++++E P++ K+F ++G CK N L+++++ F ++K++++
Sbjct: 357 KDGEFMQRVLDSLEFFPESSKIFS----SSG-CKRVNAKTDLEISKM-GFSLNSKKEFND 410
Query: 489 EI 494
E+
Sbjct: 411 EL 412
>Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical
protein K07A1.8 protein.
Length = 492
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 423 NQQLKVTQLANFVPMNEK-KYDEEIENYRLQLEK 521
N+Q K +A +P EK KYDEE E + E+
Sbjct: 251 NEQQKPVPVAEQIPQQEKQKYDEEFERQMKEYEQ 284
>U00052-4|AAK21419.2| 438|Caenorhabditis elegans Hypothetical
protein K02F3.7 protein.
Length = 438
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 276 CPKCEQYNGFTEDGDYNKPIVNNVEETPKTPKVFQRTLPN 395
CPK E+Y+ + Y+K V E PKT FQ P+
Sbjct: 175 CPKYERYH-YASQFIYSKAEKGKVLEGPKTSTTFQLLAPS 213
>DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like
protein protein.
Length = 492
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 423 NQQLKVTQLANFVPMNEK-KYDEEIENYRLQLEK 521
N+Q K +A +P EK KYDEE E + E+
Sbjct: 251 NEQQKPVPVAEQIPQQEKQKYDEEFERQMKEYEQ 284
>AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical
protein F20H11.1 protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 216 NCWFCNSNFWVKFIERNSWTCPKCEQYNGFTE 311
+C C + + K ER S CP+CE+ TE
Sbjct: 439 SCATCLAVYHKKCFERKSLNCPRCERRRKRTE 470
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,276,386
Number of Sequences: 27780
Number of extensions: 291517
Number of successful extensions: 893
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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