Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_N22
(832 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 26 0.49
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 0.86
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.5
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 3.5
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 4.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 6.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.0
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 8.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 8.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 8.0
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 253 NFTQKFELQNQQLTRHDNNNRKLYINLN 170
N+ + N ++NN +KLY N+N
Sbjct: 329 NYNNNYNNYNNYNNNYNNNYKKLYYNIN 356
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -1
Query: 271 QLLRSINFTQKFELQNQQLTRHDNNNRKLYINLN 170
+++ S++ + N ++N N+KLY N+N
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNYNNYNKKLYYNIN 113
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 3.5
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +3
Query: 234 SNFWVKFIERNSWTCPKCEQYNGFTEDGDYNKPIVNNVEETPKTPKVFQRT 386
S+ +K ER+ C N F D IV V E P KV ++
Sbjct: 838 SDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKS 888
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 268 AGLVQSVNNITASLRM 315
AG + S+NN+TA+ +M
Sbjct: 296 AGKIMSINNLTATAQM 311
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 344 IIDYRLIVIPILSEAVILFTLWTSP 270
I+D+ +I+ I+ + V + +W SP
Sbjct: 264 IVDFFMILNEIIMKLVGIIIMWYSP 288
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 594 PKRSLFLYLISXVLLFYMDCIIYMLFLTVTCNSQFLHHISSHSL 463
P SL + L+ LLF M + +++TV + S+H++
Sbjct: 303 PPTSLAIPLLGKYLLFTMILVTLSIWITVCVLNVHFRSPSTHNM 346
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/14 (64%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
Frame = -1
Query: 208 HDNN-NRKLYINLN 170
+DNN N+KLY N+N
Sbjct: 98 NDNNYNKKLYYNIN 111
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 226 NQQLTRHDNNNRKLYINLN 170
N ++NN +KLY N+N
Sbjct: 99 NYNNNNYNNNCKKLYYNIN 117
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 226 NQQLTRHDNNNRKLYINLN 170
N ++NN +KLY N+N
Sbjct: 99 NYNNNNYNNNCKKLYYNIN 117
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 226 NQQLTRHDNNNRKLYINLN 170
N ++NN +KLY N+N
Sbjct: 99 NYNNNNYNNNCKKLYYNIN 117
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 226 NQQLTRHDNNNRKLYINLN 170
N ++NN +KLY N+N
Sbjct: 99 NYNNNNYNNNCKKLYYNIN 117
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 202 NNNRKLYINLN 170
NN RKLY N+N
Sbjct: 102 NNYRKLYYNIN 112
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 226 NQQLTRHDNNNRKLYINLN 170
N ++NN +KLY N+N
Sbjct: 94 NNYKYNYNNNCKKLYYNIN 112
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = -1
Query: 232 LQNQQLTRHDN----NNRKLYINLN 170
L N+ + ++N NN+KLY N+N
Sbjct: 307 LSNKTIHNNNNYNNYNNKKLYYNIN 331
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,040
Number of Sequences: 438
Number of extensions: 4007
Number of successful extensions: 49
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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