Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N21
         (893 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    28   0.10 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   8.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 0.10
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 702 GEHTWDEHTFTNGNIYLGIGKPALQPK 782
           GEH W   T TN  +   I K  + PK
Sbjct: 218 GEHDWSSKTETNATVLHSINKVIIHPK 244


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 528 DYFSDREDNNPAYYISPALQK 590
           D  S+ E+N P Y +S A QK
Sbjct: 73  DTTSENEENYPHYQMSGAKQK 93


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 658 PETWPSVIDIFGQSFT 611
           PE W  VID  GQ  T
Sbjct: 326 PERWQKVIDQNGQHIT 341


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,492
Number of Sequences: 438
Number of extensions: 5104
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)