Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N17
         (903 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001691-1|AAN71446.1|  279|Drosophila melanogaster RE58929p pro...    79   1e-14
AE013599-3997|AAF47303.1|  279|Drosophila melanogaster CG2765-PA...    79   1e-14
AY119479-1|AAM50133.1|   71|Drosophila melanogaster GH06385p pro...    30   5.0  
AE014296-2198|AAF49875.3| 1988|Drosophila melanogaster CG11008-P...    29   6.6  

>BT001691-1|AAN71446.1|  279|Drosophila melanogaster RE58929p
           protein.
          Length = 279

 Score = 78.6 bits (185), Expect = 1e-14
 Identities = 43/66 (65%), Positives = 51/66 (77%)
 Frame = +1

Query: 217 MSFNTDISTKLENSRNTLRKIARNDGAEFSKQSILNDMEKFVKMVNTMDETVLVPSRLMN 396
           MS  TD+ TKLE SRN LR+IAR+D  +FSK SI+N MEKFVK VN MD+T+LVP RLM+
Sbjct: 1   MSGYTDL-TKLETSRNCLRRIARHDEQQFSKDSIVNVMEKFVKTVNIMDDTILVPCRLMD 59

Query: 397 LPQEGD 414
             Q GD
Sbjct: 60  -RQIGD 64


>AE013599-3997|AAF47303.1|  279|Drosophila melanogaster CG2765-PA
           protein.
          Length = 279

 Score = 78.6 bits (185), Expect = 1e-14
 Identities = 43/66 (65%), Positives = 51/66 (77%)
 Frame = +1

Query: 217 MSFNTDISTKLENSRNTLRKIARNDGAEFSKQSILNDMEKFVKMVNTMDETVLVPSRLMN 396
           MS  TD+ TKLE SRN LR+IAR+D  +FSK SI+N MEKFVK VN MD+T+LVP RLM+
Sbjct: 1   MSGYTDL-TKLETSRNCLRRIARHDEQQFSKDSIVNVMEKFVKTVNIMDDTILVPCRLMD 59

Query: 397 LPQEGD 414
             Q GD
Sbjct: 60  -RQIGD 64


>AY119479-1|AAM50133.1|   71|Drosophila melanogaster GH06385p
           protein.
          Length = 71

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 640 NHVDDGDTQRRPSLRTRVHLRLRFQSHPLH 551
           N +   DT   P++RT+ H  LR   HP H
Sbjct: 22  NSIRSNDTSPGPTIRTQPHFLLRAYVHPCH 51


>AE014296-2198|AAF49875.3| 1988|Drosophila melanogaster CG11008-PA
            protein.
          Length = 1988

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 14/62 (22%), Positives = 28/62 (45%)
 Frame = +1

Query: 211  QKMSFNTDISTKLENSRNTLRKIARNDGAEFSKQSILNDMEKFVKMVNTMDETVLVPSRL 390
            QK+    D+S K + +R +LR    N+      + ++N +       + M++ V  P+  
Sbjct: 1541 QKLDDVPDVSVKSKGTRKSLRASLNNEVPAIQPEPVINTVSSSENSTSKMEDVVTEPNDT 1600

Query: 391  MN 396
             N
Sbjct: 1601 KN 1602


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,731,941
Number of Sequences: 53049
Number of extensions: 718835
Number of successful extensions: 1439
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)