Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N15
         (885 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069119-1|AAL39264.1|  614|Drosophila melanogaster GH13094p pro...    31   2.8  
AE014298-2700|AAF48825.2|  614|Drosophila melanogaster CG6123-PA...    31   2.8  
X53275-1|CAB37863.1|  700|Drosophila melanogaster neurogenic pro...    29   6.5  
AY051981-1|AAK93405.1|  696|Drosophila melanogaster LD45157p pro...    29   6.5  
AE014134-1748|AAF52844.1|  696|Drosophila melanogaster CG4722-PA...    29   6.5  
AJ252125-1|CAB64387.1|  470|Drosophila melanogaster Sox14 protei...    29   8.5  
AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-P...    29   8.5  
AE013599-3763|AAF47126.2|  669|Drosophila melanogaster CG3090-PB...    29   8.5  
AE013599-3762|AAM68286.1|  669|Drosophila melanogaster CG3090-PA...    29   8.5  

>AY069119-1|AAL39264.1|  614|Drosophila melanogaster GH13094p
           protein.
          Length = 614

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 631 GGSGAAEAGRGQSGEKFSRGAGQQSGRVTGWRSAA 735
           GGSGA  +G G S    SRGA  ++G+ +G  S +
Sbjct: 523 GGSGAGSSGGGASTSAASRGATPKAGKDSGSASGS 557


>AE014298-2700|AAF48825.2|  614|Drosophila melanogaster CG6123-PA
           protein.
          Length = 614

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 631 GGSGAAEAGRGQSGEKFSRGAGQQSGRVTGWRSAA 735
           GGSGA  +G G S    SRGA  ++G+ +G  S +
Sbjct: 523 GGSGAGSSGGGASTSAASRGATPKAGKDSGSASGS 557


>X53275-1|CAB37863.1|  700|Drosophila melanogaster neurogenic
           protein big brain protein.
          Length = 700

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 725 RHPVTRPDCWPAPRLNFSPDCPRPASAAPEP 633
           RHP   P   P P L ++P  P+P +A P+P
Sbjct: 593 RHPSVEPSPPPPPMLMYAPP-PQPNAAHPQP 622


>AY051981-1|AAK93405.1|  696|Drosophila melanogaster LD45157p
           protein.
          Length = 696

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 725 RHPVTRPDCWPAPRLNFSPDCPRPASAAPEP 633
           RHP   P   P P L ++P  P+P +A P+P
Sbjct: 594 RHPSVEPSPPPPPMLMYAPP-PQPNAAHPQP 623


>AE014134-1748|AAF52844.1|  696|Drosophila melanogaster CG4722-PA
           protein.
          Length = 696

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 725 RHPVTRPDCWPAPRLNFSPDCPRPASAAPEP 633
           RHP   P   P P L ++P  P+P +A P+P
Sbjct: 594 RHPSVEPSPPPPPMLMYAPP-PQPNAAHPQP 623


>AJ252125-1|CAB64387.1|  470|Drosophila melanogaster Sox14 protein
           protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 725 RHPVTRPDCWPAPRLNFSPDCPRPASAAPEPPQWSPG 615
           RHP  + D  P     FSP  P PAS+    P  +PG
Sbjct: 40  RHPAPKADSTPHTLPPFSPS-PSPASSPSPAPAQTPG 75


>AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-PA
           protein.
          Length = 926

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 26/76 (34%), Positives = 28/76 (36%)
 Frame = +1

Query: 619 GDHCGGSGAAEAGRGQSGEKFSRGAGQQSGRVTGWRSAAAXXQTXGRVLRXQQXKPVPTG 798
           G H G +GAA    G SG  +   AG   G   G        Q    V   QQ  P   G
Sbjct: 505 GYHHGPAGAAT---GASGHGYQPNAGAGQGPPPGAYPPPPGSQQVPPVPGQQQPPP---G 558

Query: 799 XXXPGTGPIXGQLQVP 846
              PG  P  GQ Q P
Sbjct: 559 PPPPGQPPTGGQQQPP 574


>AE013599-3763|AAF47126.2|  669|Drosophila melanogaster CG3090-PB,
           isoform B protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 725 RHPVTRPDCWPAPRLNFSPDCPRPASAAPEPPQWSPG 615
           RHP  + D  P     FSP  P PAS+    P  +PG
Sbjct: 40  RHPAPKADSTPHTLPPFSPS-PSPASSPSPAPAQTPG 75


>AE013599-3762|AAM68286.1|  669|Drosophila melanogaster CG3090-PA,
           isoform A protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 725 RHPVTRPDCWPAPRLNFSPDCPRPASAAPEPPQWSPG 615
           RHP  + D  P     FSP  P PAS+    P  +PG
Sbjct: 40  RHPAPKADSTPHTLPPFSPS-PSPASSPSPAPAQTPG 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,437,834
Number of Sequences: 53049
Number of extensions: 726322
Number of successful extensions: 2913
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2875
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)