Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N12
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    28   0.100
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         22   6.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   6.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   8.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   8.6  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   8.6  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   8.6  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 0.100
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +3

Query: 174 VTRVAESRTEFKLKSLPEDAISSVKFAPKSNQYLLVSSWDCSVRLYDVTANIERHKYN 347
           V  +A     FK+  +   A+ SVK         L   +  +++LY +T N+E   YN
Sbjct: 52  VVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYK-NIKLYGLTKNLEIKNYN 108


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 699 LHAPCYERPIQIFYVPMYQLRTFRQ 625
           +HA C   P  ++  P+Y+LR   +
Sbjct: 14  VHASCASVPKVVYDGPIYELRQIEE 38


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 408 VHHYMNEQHPENKHQE 361
           +HH M+ QHP  + Q+
Sbjct: 168 MHHQMHTQHPHMQPQQ 183


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 420 ESDLVHHYMN 391
           E DLVH+YMN
Sbjct: 528 EVDLVHNYMN 537


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 420 ESDLVHHYMN 391
           E DLVH+YMN
Sbjct: 528 EVDLVHNYMN 537


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 420 ESDLVHHYMN 391
           E DLVH+YMN
Sbjct: 154 EVDLVHNYMN 163


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 516 VLTGSWDGTVKMWDSRVPNCVGTYNQ 593
           + TGS+D     WD+  P      NQ
Sbjct: 124 IKTGSYDYPSPEWDTVTPEAKNLINQ 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,958
Number of Sequences: 438
Number of extensions: 4666
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)