Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N11
         (946 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    36   0.001
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    31   0.038
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.36 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   4.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.4  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   4.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   5.8  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   5.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 6/64 (9%)
 Frame = -1

Query: 862 GGGGAXGGGXGXXXXXXXXXXXXXXXXPRXXXGGPXGGXPGGXRPGXGXX------PXGG 701
           GGGG  GGG G                 +    G  GG  GG  PG G        P GG
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227

Query: 700 XGGG 689
            GGG
Sbjct: 228 GGGG 231



 Score = 31.1 bits (67), Expect = 0.051
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -2

Query: 765 GGRGGGXPGGXXRGXAXXXXGXGGGG 688
           GG GGG PGG          G GGGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGG 230


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 31.5 bits (68), Expect = 0.038
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -2

Query: 765 GGRGGGXPGGXXRGXAXXXXGXGGGG 688
           GGRGGG   G  RG      G GGGG
Sbjct: 73  GGRGGGRGRGRGRGGRDGGGGFGGGG 98



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -2

Query: 765 GGRGGGXPGGXXRGXAXXXXGXGGGG 688
           GGRGG    G  RG      G  GGG
Sbjct: 67  GGRGGRGGRGGGRGRGRGRGGRDGGG 92


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.36
 Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = +3

Query: 681 PQAPPPXPPXGXLPXP-GRXPPGXP 752
           P APPP PP G  P P    P G P
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGP 606



 Score = 27.5 bits (58), Expect = 0.62
 Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
 Frame = +3

Query: 681 PQAPPPXPPXGX--LPXPGRXPPGXPPXXXXXXXXXXXXXXXXXXXXXXXXXPXP-PPXA 851
           P  PPP PP G   L  P +  P  PP                         P   PP A
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLP--PPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPA 584

Query: 852 PPPPXXWG 875
           PPPP   G
Sbjct: 585 PPPPPPMG 592



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 725 PRXXPPGXPPPRPP 766
           P   PP  PPP PP
Sbjct: 577 PNAQPPPAPPPPPP 590


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 762 GRGGGXPGGXXRGXAXXXXGXGGGG 688
           G GGG  GG  RG +    G   GG
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGG 862


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -2

Query: 765 GGRGGGXPGGXXRGXAXXXXGXGGGG 688
           GG GGG  GG            GGGG
Sbjct: 655 GGGGGGGGGGSVGSGGIGSSSLGGGG 680



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 874 PXXXGGGGAXGGGXG 830
           P   GGGG  GGG G
Sbjct: 650 PGSGGGGGGGGGGGG 664


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 6/42 (14%)
 Frame = +3

Query: 648 RPXG--GGXRXSXPQAPPPXPPXGXLPXPGRXP----PGXPP 755
           RP G  G  R   P  P P  P G  P P   P    P  PP
Sbjct: 193 RPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPP 234



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 766 GGPXGGXPGGXRPGXGXXPXG 704
           GG  GG P G RP     P G
Sbjct: 306 GGAPGGPPQGMRPNFYNRPMG 326


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 751 GXPGGXRPGXGXXPXGGXGGGA*G 680
           G   G  PG G    GG GGG+ G
Sbjct: 84  GLSHGPSPGAGGTGSGGSGGGSGG 107


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 874 PXXXGGGGAXGGGXG 830
           P   GGGG  GGG G
Sbjct: 543 PAGVGGGGGGGGGGG 557


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 874 PXXXGGGGAXGGGXG 830
           P   GGGG  GGG G
Sbjct: 10  PLRAGGGGGGGGGGG 24


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 356,354
Number of Sequences: 2352
Number of extensions: 5517
Number of successful extensions: 133
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)