Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N10
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.7  
03_04_0061 - 16949038-16950006                                         30   2.7  
12_02_0692 - 22197582-22198214,22198761-22198935,22199089-221991...    29   6.3  
04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414     29   6.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.3  
06_03_0218 + 18219956-18220555                                         28   8.3  

>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 636 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 517
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 603 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGAS 722
           RT+K PG+   ++PRA+  + P  Y   VR +   +R AS
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSAS 294


>12_02_0692 -
           22197582-22198214,22198761-22198935,22199089-22199185,
           22199359-22199473,22199546-22199633,22199972-22200063,
           22200138-22200629,22201025-22201048,22201348-22203489
          Length = 1285

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +3

Query: 561 SQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGASHTSCRI 740
           S K   ++   K  +  + P  +P  LPRAL+    AA R+P+   P  +R    T+  +
Sbjct: 164 SGKGNHRNRKRKSHQQRQSPAAAPSLLPRALALLADAAGRLPLGEHPDARRSLVDTAAEL 223


>04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414
          Length = 520

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +1

Query: 613 RYQA-FPPGSSLVRSPVPTLPL--TGYLSAFLPSGSVALLIPAVGSXR 747
           R QA F P   L  SP P+ P   +GYL +    GS  + IP VG  R
Sbjct: 276 RQQARFSPPHLLNASPTPSPPNFPSGYLQSRPKGGSAPMSIPQVGDRR 323


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 708 SRREKGGQVSG--KRQGRNRRAHEGASRGKRLVS 613
           +RRE+  + +G  KR+GR R    G  RGKR  S
Sbjct: 106 ARRERRLEAAGAEKREGRRRGGSSGGLRGKRRAS 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,534,638
Number of Sequences: 37544
Number of extensions: 456096
Number of successful extensions: 1536
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)