Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N09
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          26   1.8  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         25   4.1  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   7.2  

>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 147 YMEC*FIFLYHIFIYKIRFLCKKTLXF 67
           Y EC FIFLY +    IR   +K L F
Sbjct: 131 YTECSFIFLYILCTMSIRQNIQKMLGF 157


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = -2

Query: 486 VLKDQRFVRISFHKQPLTVIRQVKIQG*KHLQWEESLYCQIPMKLWVSYHSTD 328
           V+ D+    +++  Q  T++  V++   K L W+ +   Q+P+   V  H++D
Sbjct: 46  VIPDKTAAYVAYGGQE-TLVEHVEVLVHKQLIWDTASAGQVPLGAVVGGHTSD 97


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 390 TGGVFNLEFSPDGSLLVAACEKK 458
           TG V NLE   D  + V  CEK+
Sbjct: 239 TGNVDNLEAGLDALMQVLVCEKQ 261


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 923,853
Number of Sequences: 2352
Number of extensions: 19633
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)