Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N07
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   4.0  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 16/77 (20%), Positives = 31/77 (40%)
 Frame = +1

Query: 277 FDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKI 456
           F   + +D A+  + V E  + I  + +  +    ++ G  G    V +  +     + I
Sbjct: 203 FKQCSTDDYAVAGRFVSEAVNEIFTDTETESEGFAIIRGIFGPIFVVVMKALRAASLITI 262

Query: 457 TEWITPIDIEFPNDNAN 507
             W+ P    FP+D  N
Sbjct: 263 ECWVMPFLQVFPSDKNN 279



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 634  PIVFICSESSTDKKTTSGNLFSDQLKNQLNIHHISFNGVSTTG-LRSALNEWQR 792
            P++   S  + D+ T + +L SDQ  +  N   ++   V     L++ ++ W R
Sbjct: 989  PVILPSSRITVDRSTIARHLLSDQ-SDPFNRSPLTMEQVKRNDELKAKIDAWMR 1041


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,236
Number of Sequences: 2352
Number of extensions: 14684
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)