Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_N07
(870 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 73 1e-12
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 73 1e-12
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 73 1e-12
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 73 1e-12
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 73 1e-12
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 73 1e-12
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 73 1e-12
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 73 1e-12
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 73 1e-12
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 73 1e-12
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 73 1e-12
AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein. 73 2e-12
AF098533-1|AAC97950.1| 505|Homo sapiens RAD17 isoform 3 protein. 57 1e-07
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 34 0.77
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 34 0.77
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 34 0.77
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 34 0.77
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 34 0.77
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 34 0.77
BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated pr... 31 5.4
BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated pr... 31 5.4
AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated pr... 31 5.4
AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecu... 31 5.4
AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein. 31 5.4
AK055927-1|BAB71048.1| 141|Homo sapiens protein ( Homo sapiens ... 31 7.2
X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for ... 30 9.5
X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for ... 30 9.5
BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 30 9.5
BC130373-1|AAI30374.1| 633|Homo sapiens ClpX caseinolytic pepti... 30 9.5
BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 9.5
AJ276980-1|CAC01291.1| 633|Homo sapiens ClpX protein protein. 30 9.5
AJ006267-1|CAA06933.2| 633|Homo sapiens ClpX-like protein protein. 30 9.5
AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein. 30 9.5
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 92 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 151
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 152 KEHGIQVQEWINPVLPDFQKDD 173
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 219 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 277
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 278 EECSISNISFNPVAPTIMMKFLN 300
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIA 435
+ + P ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++
Sbjct: 81 VDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILS 140
Query: 436 KKHNVKITEWITPIDIEFPNDN 501
K+H +++ EWI P+ +F D+
Sbjct: 141 KEHGIQVQEWINPVLPDFQKDD 162
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 208 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 266
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 267 EECSISNISFNPVAPTIMMKFLN 289
>AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein.
Length = 584
Score = 72.5 bits (170), Expect = 2e-12
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Frame = +1
Query: 286 VNINDLAIHNKKVQEVEDWILGNI----KKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVK 453
+N ++LA+H KK++EVE W+ + K +LL+TGP GCGK+ T+ ++K+H ++
Sbjct: 1 MNQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQ 60
Query: 454 ITEWITPIDIEFPNDN 501
+ EWI P+ +F D+
Sbjct: 61 VQEWINPVLPDFQKDD 76
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 122 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 180
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 181 EECSISNISFNPVAPTIMMKFLN 203
>AF098533-1|AAC97950.1| 505|Homo sapiens RAD17 isoform 3 protein.
Length = 505
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 532 DRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLK 711
D+K++LVED PN F R L VL++Y + + P++FI S+S + LF +++
Sbjct: 43 DKKIILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSG-DNNQRLLFPKEIQ 101
Query: 712 NQLNIHHISFNGVSTTGLRSALN 780
+ +I +ISFN V+ T + LN
Sbjct: 102 EECSISNISFNPVAPTIMMKFLN 124
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKK 441
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKK 441
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKK 441
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKK 441
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKK 441
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 23 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 76
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKK 441
+ + P +NDL H Q++ I I ++ LLL GP G GK+ T+L AK+
Sbjct: 37 VEKYRPQTLNDLISH----QDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQ 90
>BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 31.1 bits (67), Expect = 5.4
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +1
Query: 274 NFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVK 453
NFD + NKK++ ++D I N K + SE ++L G G +T+ K +
Sbjct: 189 NFDGHVVLPYRFRNKKMKTLKDVIALNFKTSESEGVILHGEGQQGDYITLELKKAKLVLS 248
Query: 454 ITEWITPIDIEFPNDNANFTSLLDNNDRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKS 633
+ + + + + SLLD++ V++E + T L +Q ++ +
Sbjct: 249 LNLGSNQLGPIYGHTSVMTGSLLDDHHWHSVVIERQGRSINLT---LDRSMQHFRTNGEF 305
Query: 634 PIVFICSESSTDKKTTSGNLFSDQLKNQLN-IHHISFNGVSTTGL 765
+ + E + SG S KN + I++NGV+ T L
Sbjct: 306 DYLDLDYEITFGGIPFSGKPSSSSRKNFKGCMESINYNGVNITDL 350
>BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 31.1 bits (67), Expect = 5.4
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +1
Query: 274 NFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVK 453
NFD + NKK++ ++D I N K + SE ++L G G +T+ K +
Sbjct: 189 NFDGHVVLPYRFRNKKMKTLKDVIALNFKTSESEGVILHGEGQQGDYITLELKKAKLVLS 248
Query: 454 ITEWITPIDIEFPNDNANFTSLLDNNDRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKS 633
+ + + + + SLLD++ V++E + T L +Q ++ +
Sbjct: 249 LNLGSNQLGPIYGHTSVMTGSLLDDHHWHSVVIERQGRSINLT---LDRSMQHFRTNGEF 305
Query: 634 PIVFICSESSTDKKTTSGNLFSDQLKNQLN-IHHISFNGVSTTGL 765
+ + E + SG S KN + I++NGV+ T L
Sbjct: 306 DYLDLDYEITFGGIPFSGKPSSSSRKNFKGCMESINYNGVNITDL 350
>AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated
protein 2 protein.
Length = 1331
Score = 31.1 bits (67), Expect = 5.4
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +1
Query: 274 NFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVK 453
NFD + NKK++ ++D I N K + SE ++L G G +T+ K +
Sbjct: 189 NFDGHVVLPYRFRNKKMKTLKDVIALNFKTSESEGVILHGEGQQGDYITLELKKAKLVLS 248
Query: 454 ITEWITPIDIEFPNDNANFTSLLDNNDRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKS 633
+ + + + + SLLD++ V++E + T L +Q ++ +
Sbjct: 249 LNLGSNQLGPIYGHTSVMTGSLLDDHHWHSVVIERQGRSINLT---LDRSMQHFRTNGEF 305
Query: 634 PIVFICSESSTDKKTTSGNLFSDQLKNQLN-IHHISFNGVSTTGL 765
+ + E + SG S KN + I++NGV+ T L
Sbjct: 306 DYLDLDYEITFGGIPFSGKPSSSSRKNFKGCMESINYNGVNITDL 350
>AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecule
Caspr2 protein.
Length = 1331
Score = 31.1 bits (67), Expect = 5.4
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +1
Query: 274 NFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVK 453
NFD + NKK++ ++D I N K + SE ++L G G +T+ K +
Sbjct: 189 NFDGHVVLPYRFRNKKMKTLKDVIALNFKTSESEGVILHGEGQQGDYITLELKKAKLVLS 248
Query: 454 ITEWITPIDIEFPNDNANFTSLLDNNDRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKS 633
+ + + + + SLLD++ V++E + T L +Q ++ +
Sbjct: 249 LNLGSNQLGPIYGHTSVMTGSLLDDHHWHSVVIERQGRSINLT---LDRSMQHFRTNGEF 305
Query: 634 PIVFICSESSTDKKTTSGNLFSDQLKNQLN-IHHISFNGVSTTGL 765
+ + E + SG S KN + I++NGV+ T L
Sbjct: 306 DYLDLDYEITFGGIPFSGKPSSSSRKNFKGCMESINYNGVNITDL 350
>AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein.
Length = 1339
Score = 31.1 bits (67), Expect = 5.4
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +1
Query: 274 NFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVK 453
NFD + NKK++ ++D I N K + SE ++L G G +T+ K +
Sbjct: 197 NFDGHVVLPYRFRNKKMKTLKDVIALNFKTSESEGVILHGEGQQGDYITLELKKAKLVLS 256
Query: 454 ITEWITPIDIEFPNDNANFTSLLDNNDRKLVLVEDFPNTFMRTPSELVYVLQQYKQRAKS 633
+ + + + + SLLD++ V++E + T L +Q ++ +
Sbjct: 257 LNLGSNQLGPIYGHTSVMTGSLLDDHHWHSVVIERQGRSINLT---LDRSMQHFRTNGEF 313
Query: 634 PIVFICSESSTDKKTTSGNLFSDQLKNQLN-IHHISFNGVSTTGL 765
+ + E + SG S KN + I++NGV+ T L
Sbjct: 314 DYLDLDYEITFGGIPFSGKPSSSSRKNFKGCMESINYNGVNITDL 358
>AK055927-1|BAB71048.1| 141|Homo sapiens protein ( Homo sapiens
cDNA FLJ31365 fis, clone NB9N41000135, highly similar to
RAS-RELATED PROTEIN RAB-1A. ).
Length = 141
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 379 LLLTGPVGCGKSVTVLTIAKKHNVKITEWITPIDIEFPNDNAN 507
LLL G G GKS +L A+ N + +W+ ID + ++N N
Sbjct: 14 LLLIGDSGVGKSCLLLRFAESFN-NVKQWLQEID-RYASENVN 54
>X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for p68
protein. ).
Length = 614
Score = 30.3 bits (65), Expect = 9.5
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 4/139 (2%)
Frame = +1
Query: 301 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPID 480
+ IH K Q+ DW+L K + +L+ T G V +VK I+
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV--------EDVKFV-----IN 415
Query: 481 IEFPNDNANFTSLLDNNDR--KLVLVEDF--PNTFMRTPSELVYVLQQYKQRAKSPIVFI 648
++PN + ++ + R K F PN ++ S+L+ VL++ Q ++ +
Sbjct: 416 YDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN-IKQVSDLISVLREANQAINPKLLQL 474
Query: 649 CSESSTDKKTTSGNLFSDQ 705
+ + + G + D+
Sbjct: 475 VEDRGSGRSRGRGGMKDDR 493
>X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for
nuclear p68 protein. ).
Length = 614
Score = 30.3 bits (65), Expect = 9.5
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 4/139 (2%)
Frame = +1
Query: 301 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPID 480
+ IH K Q+ DW+L K + +L+ T G V +VK I+
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV--------EDVKFV-----IN 415
Query: 481 IEFPNDNANFTSLLDNNDR--KLVLVEDF--PNTFMRTPSELVYVLQQYKQRAKSPIVFI 648
++PN + ++ + R K F PN ++ S+L+ VL++ Q ++ +
Sbjct: 416 YDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN-IKQVSDLISVLREANQAINPKLLQL 474
Query: 649 CSESSTDKKTTSGNLFSDQ 705
+ + + G + D+
Sbjct: 475 VEDRGSGRSRGRGGMKDDR 493
>BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
68kDa) protein.
Length = 614
Score = 30.3 bits (65), Expect = 9.5
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 4/139 (2%)
Frame = +1
Query: 301 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPID 480
+ IH K Q+ DW+L K + +L+ T G V +VK I+
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV--------EDVKFV-----IN 415
Query: 481 IEFPNDNANFTSLLDNNDR--KLVLVEDF--PNTFMRTPSELVYVLQQYKQRAKSPIVFI 648
++PN + ++ + R K F PN ++ S+L+ VL++ Q ++ +
Sbjct: 416 YDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN-IKQVSDLISVLREANQAINPKLLQL 474
Query: 649 CSESSTDKKTTSGNLFSDQ 705
+ + + G + D+
Sbjct: 475 VEDRGSGRSRGRGGMKDDR 493
>BC130373-1|AAI30374.1| 633|Homo sapiens ClpX caseinolytic
peptidase X homolog (E. coli) protein.
Length = 633
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 292 INDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAK 438
+N K+ EV D +IK S +LLL GP G GK++ T+AK
Sbjct: 261 VNQQIPQEKRGGEVLDSSHDDIKLEKSNILLL-GPTGSGKTLLAQTLAK 308
>BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 5 protein.
Length = 614
Score = 30.3 bits (65), Expect = 9.5
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 4/139 (2%)
Frame = +1
Query: 301 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPID 480
+ IH K Q+ DW+L K + +L+ T G V +VK I+
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV--------EDVKFV-----IN 415
Query: 481 IEFPNDNANFTSLLDNNDR--KLVLVEDF--PNTFMRTPSELVYVLQQYKQRAKSPIVFI 648
++PN + ++ + R K F PN ++ S+L+ VL++ Q ++ +
Sbjct: 416 YDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN-IKQVSDLISVLREANQAINPKLLQL 474
Query: 649 CSESSTDKKTTSGNLFSDQ 705
+ + + G + D+
Sbjct: 475 VEDRGSGRSRGRGGMKDDR 493
>AJ276980-1|CAC01291.1| 633|Homo sapiens ClpX protein protein.
Length = 633
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 292 INDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAK 438
+N K+ EV D +IK S +LLL GP G GK++ T+AK
Sbjct: 261 VNQQIPQEKRGGEVLDSSHDDIKLEKSNILLL-GPTGSGKTLLAQTLAK 308
>AJ006267-1|CAA06933.2| 633|Homo sapiens ClpX-like protein protein.
Length = 633
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 292 INDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAK 438
+N K+ EV D +IK S +LLL GP G GK++ T+AK
Sbjct: 261 VNQQIPQEKRGGEVLDSSHDDIKLEKSNILLL-GPTGSGKTLLAQTLAK 308
>AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein.
Length = 614
Score = 30.3 bits (65), Expect = 9.5
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 4/139 (2%)
Frame = +1
Query: 301 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPID 480
+ IH K Q+ DW+L K + +L+ T G V +VK I+
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV--------EDVKFV-----IN 415
Query: 481 IEFPNDNANFTSLLDNNDR--KLVLVEDF--PNTFMRTPSELVYVLQQYKQRAKSPIVFI 648
++PN + ++ + R K F PN ++ S+L+ VL++ Q ++ +
Sbjct: 416 YDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN-IKQVSDLISVLREANQAINPKLLQL 474
Query: 649 CSESSTDKKTTSGNLFSDQ 705
+ + + G + D+
Sbjct: 475 VEDRGSGRSRGRGGMKDDR 493
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,226,256
Number of Sequences: 237096
Number of extensions: 1938868
Number of successful extensions: 4270
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4252
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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