Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_N07
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81521-2|CAB04224.1| 514|Caenorhabditis elegans Hypothetical pr... 60 3e-09
AF076840-1|AAC95522.1| 514|Caenorhabditis elegans Rad17-like pr... 60 3e-09
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 45 8e-05
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 32 0.61
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 32 0.61
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 31 0.81
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 29 4.3
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 29 4.3
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 5.7
U41037-2|AAA82388.3| 651|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 28 7.5
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 28 7.5
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 28 7.5
Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 28 10.0
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 28 10.0
AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical... 28 10.0
>Z81521-2|CAB04224.1| 514|Caenorhabditis elegans Hypothetical
protein F32A11.2 protein.
Length = 514
Score = 59.7 bits (138), Expect = 3e-09
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Frame = +1
Query: 283 PVNINDLAIHNKKVQEVEDWILGNIKKNTSEM--LLLTGPVGCGKSVTVLTIAKKHNVKI 456
P ++L IHNKK+ EV+ W+ ++ ++ + LTGP G GKS TV + + N++I
Sbjct: 15 PRRRDELQIHNKKIAEVDHWLKNVFSESNKQLGVMYLTGPAGSGKSTTVEVMCTEQNIEI 74
Query: 457 TEWITPI--DIEFPNDNANFTSLL------------DNNDRKLVLVEDFPNTFMRTPSEL 594
E+ + +F + +FT L ++L+LV + P+ +
Sbjct: 75 IEYSPEYLHNEDFECEKPDFTQLRRFLLRRHGSLRGGGLKKRLLLVTELPDQAYSDAEKF 134
Query: 595 VYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLKNQLNIHHISFNGVSTTGLRSA 774
L + Q P++F + S LF+ I ++FN V+ + ++ A
Sbjct: 135 REDLSEVLQHIWHPVIFCLTNSIACWNLNPDRLFTKDFNIMNGIDTVTFNPVADSFMKKA 194
Query: 775 L 777
L
Sbjct: 195 L 195
>AF076840-1|AAC95522.1| 514|Caenorhabditis elegans Rad17-like
protein protein.
Length = 514
Score = 59.7 bits (138), Expect = 3e-09
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Frame = +1
Query: 283 PVNINDLAIHNKKVQEVEDWILGNIKKNTSEM--LLLTGPVGCGKSVTVLTIAKKHNVKI 456
P ++L IHNKK+ EV+ W+ ++ ++ + LTGP G GKS TV + + N++I
Sbjct: 15 PRRRDELQIHNKKIAEVDHWLKNVFSESNKQLGVMYLTGPAGSGKSTTVEVMCTEQNIEI 74
Query: 457 TEWITPI--DIEFPNDNANFTSLL------------DNNDRKLVLVEDFPNTFMRTPSEL 594
E+ + +F + +FT L ++L+LV + P+ +
Sbjct: 75 IEYSPEYLHNEDFECEKPDFTQLRRFLLRRHGSLRGGGLKKRLLLVTELPDQAYSDAEKF 134
Query: 595 VYVLQQYKQRAKSPIVFICSESSTDKKTTSGNLFSDQLKNQLNIHHISFNGVSTTGLRSA 774
L + Q P++F + S LF+ I ++FN V+ + ++ A
Sbjct: 135 REDLSEVLQHIWHPVIFCLTNSIACWNLNPDRLFTKDFNIMNGIDTVTFNPVADSFMKKA 194
Query: 775 L 777
L
Sbjct: 195 L 195
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 44.8 bits (101), Expect = 8e-05
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Frame = +1
Query: 301 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKH-----NVKITEW 465
LA +K +EV G I++ +S+MLLL+GP G GKS +A++ +V ++
Sbjct: 307 LASLGEKEREVLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAGYSTIDVNASDA 366
Query: 466 ITPIDIEFPNDNANFTS-LLDNNDRKLVLV-EDFPNTFMRTPSELVYVLQQYKQRA-KSP 636
T D+ + A TS LD + R L+ ++ T + T LV +Q ++A + P
Sbjct: 367 RTVADLNKVLEGAVKTSRTLDADQRPACLILDEIDGTPIDTIRHLVRCIQATGKKAIRRP 426
Query: 637 IVFICSESST 666
I+ IC+ T
Sbjct: 427 IIGICNNLYT 436
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical protein
ZK455.7 protein.
Length = 1268
Score = 31.9 bits (69), Expect = 0.61
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 304 AIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHN 447
A N++ Q V D N+ N + + L GP GCGKS T+ I + ++
Sbjct: 1037 AYPNRRRQLVLDGF--NMSANFGQTVALVGPSGCGKSTTIQLIERYYD 1082
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical protein
ZK455.7 protein.
Length = 1268
Score = 31.9 bits (69), Expect = 0.61
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 304 AIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHN 447
A N++ Q V D N+ N + + L GP GCGKS T+ I + ++
Sbjct: 1037 AYPNRRRQLVLDGF--NMSANFGQTVALVGPSGCGKSTTIQLIERYYD 1082
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 31.9 bits (69), Expect = 0.61
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 304 AIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHN 447
A N++ Q V D N+ N + + L GP GCGKS T+ I + ++
Sbjct: 1023 AYPNRRRQLVLDGF--NMSANFGQTVALVGPSGCGKSTTIQLIERYYD 1068
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 268 IRNFDPVNINDLAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKK 441
+ + P +++L H + V+ + +I + T LL GP G GK+ TVL A++
Sbjct: 32 VEKYRPSKLDELVAHEQIVKTLTKFI----ENRTLPHLLFYGPPGTGKTTTVLAAARQ 85
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
T21E8.1b protein.
Length = 1204
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 352 NIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPIDIEFPNDNANFTSLLDNN 531
N+K + + L L GP GCGKS T++++ ++ + +D E D+ N + N+
Sbjct: 979 NLKVDPGKTLALVGPSGCGKS-TIISLLER-------FYHAVDGEVKIDSENVEDINLNH 1030
Query: 532 DR-KLVLVEDFPNTF 573
R L LV P F
Sbjct: 1031 LRSNLALVSQEPTLF 1045
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 352 NIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPIDIEFPNDNANFTSLLDNN 531
N+K + + L L GP GCGKS T++++ ++ + +D E D+ N + N+
Sbjct: 1038 NLKVDPGKTLALVGPSGCGKS-TIISLLER-------FYHAVDGEVKIDSENVEDINLNH 1089
Query: 532 DR-KLVLVEDFPNTF 573
R L LV P F
Sbjct: 1090 LRSNLALVSQEPTLF 1104
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.2 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 352 NIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPIDIEFPNDNANFTSLLDNN 531
N+K + + L L GP GCGKS T++++ ++ + +D E D+ N + N+
Sbjct: 1038 NLKVDPGKTLALVGPSGCGKS-TIISLLER-------FYHAVDGEVKIDSENVEDINLNH 1089
Query: 532 DR-KLVLVEDFPNTF 573
R L LV P F
Sbjct: 1090 LRSNLALVSQEPTLF 1104
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical protein
C47A10.1 protein.
Length = 1294
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = +1
Query: 352 NIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPIDIEFPNDNANFTSLLDNN 531
N+ + L L GP GCGKS + + + ++ P++ DN + + +
Sbjct: 1052 NVHVKPGQTLALVGPSGCGKSTVISLLERLYD--------PLEGAVTVDNNDLRQMNPKH 1103
Query: 532 DRK-LVLVEDFPNTFMRTPSE-LVYVLQQYKQRAKSPIVFICSESSTDK 672
RK + LV P F + E +VY LQ + I CS+++ K
Sbjct: 1104 LRKHIALVSQEPILFDTSIRENIVYGLQP-GEYTHEQIETACSKANIHK 1151
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = +1
Query: 352 NIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPIDIEFPNDNANFTSLLDNN 531
N+ + L L GP GCGKS + + + ++ P++ DN + + +
Sbjct: 1052 NVHVKPGQTLALVGPSGCGKSTVISLLERLYD--------PLEGAVTVDNNDLRQMNPKH 1103
Query: 532 DRK-LVLVEDFPNTFMRTPSE-LVYVLQQYKQRAKSPIVFICSESSTDK 672
RK + LV P F + E +VY LQ + I CS+++ K
Sbjct: 1104 LRKHIALVSQEPILFDTSIRENIVYGLQP-GEYTHEQIETACSKANIHK 1151
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 370 SEMLLLTGPVGCGKSVTVLTIAKKHNVKIT 459
S+ +LL G GCGKS TV+ +A+ IT
Sbjct: 1349 SKPILLEGAPGCGKSSTVMALAQLTGNPIT 1378
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 346 LGNIKKNTSEMLLLTGPVGCGKSVTVLTI 432
LG I +NT+ +L + GP G GK+ TI
Sbjct: 335 LGPIGRNTTRLLFVDGPGGTGKTFCYTTI 363
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +1
Query: 301 LAIHNKKVQEVEDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPID 480
L IH K Q DW+L K + ++L T G V ++K I+
Sbjct: 404 LCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDV--------DDIKFV-----IN 450
Query: 481 IEFPNDNANFTSLL---DNNDRKLVLVEDFPNTFMRTPSELVYVLQQYKQ 621
++PN++ ++ + +D+K F +T +L+ VL + KQ
Sbjct: 451 YDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500
>U41037-2|AAA82388.3| 651|Caenorhabditis elegans Hypothetical
protein T24C12.3 protein.
Length = 651
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 367 TSEMLLLTGPVGCGKSVTVLTIAKKHNVKITEWITPIDIE 486
+S+ +LL + VL IAKKH+ ++ W+ P DI+
Sbjct: 461 SSDFILLDSNLSVPVMARVLEIAKKHDKQV--WLEPTDID 498
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical protein
F42E11.1 protein.
Length = 1266
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 352 NIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHN 447
N+ E + L GP GCGKS ++ I + ++
Sbjct: 1049 NMSAQFGETVALVGPSGCGKSTSIQLIERYYD 1080
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 340 WILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAK 438
WI+ + + NTS + ++G G GK+ T + + K
Sbjct: 185 WIMKSKETNTSLSIYVSGQPGTGKTATTMRVLK 217
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 334 EDWILGNIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNVKI 456
ED+ + + + L+L GP G GK+ +AK+ N++I
Sbjct: 804 EDYEVEHQDDDLENPLVLIGPSGVGKTALFRALAKQENMRI 844
>Z79605-8|CAE18060.2| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 598 YVLQQYKQRAKS--PIVFICSESSTDKKTTSGNLFSD--QLKNQLNIHHISFNGVSTTG 762
++ + +KQ+ ++ P+VF+C+ S D N + D Q + + H++S+ ++ G
Sbjct: 127 FIRRTWKQQVETLVPVVFVCATSKNDTLKIEANKYRDILQFDFEDSYHNLSWKMMAIYG 185
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 352 NIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNV 450
N++ N + + L G GCGKS + + + ++V
Sbjct: 438 NLRVNAGQTVALVGSSGCGKSTIISLLLRYYDV 470
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 352 NIKKNTSEMLLLTGPVGCGKSVTVLTIAKKHNV 450
N++ N + + L G GCGKS + + + ++V
Sbjct: 438 NLRVNAGQTVALVGSSGCGKSTIISLLLRYYDV 470
>AL034489-11|CAL49453.1| 340|Caenorhabditis elegans Hypothetical
protein ZK678.8 protein.
Length = 340
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 598 YVLQQYKQRAKS--PIVFICSESSTDKKTTSGNLFSD--QLKNQLNIHHISFNGVSTTG 762
++ + +KQ+ ++ P+VF+C+ S D N + D Q + + H++S+ ++ G
Sbjct: 127 FIRRTWKQQVETLVPVVFVCATSKNDTLKIEANKYRDILQFDFEDSYHNLSWKMMAIYG 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,403,995
Number of Sequences: 27780
Number of extensions: 342441
Number of successful extensions: 1079
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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