Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N05
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X58720-1|CAA41556.1|  350|Drosophila melanogaster SRp55 protein.       30   3.7  
BT004500-1|AAO42664.1|  216|Drosophila melanogaster GH08123p pro...    30   3.7  
BT003286-1|AAO25044.1|  350|Drosophila melanogaster GM10155p pro...    30   3.7  
BT001750-1|AAN71505.1|  216|Drosophila melanogaster RH01580p pro...    30   3.7  
BT001495-1|AAN71250.1|  350|Drosophila melanogaster LD30815p pro...    30   3.7  
BT001417-1|AAN71172.1|  216|Drosophila melanogaster GH12433p pro...    30   3.7  
AY113327-1|AAM29332.1|  350|Drosophila melanogaster AT29232p pro...    30   3.7  
AY069302-1|AAL39447.1|  216|Drosophila melanogaster HL03687p pro...    30   3.7  
AE014297-1724|AAX52949.1|  216|Drosophila melanogaster CG10851-P...    30   3.7  
AE014297-1723|AAN13579.1|  216|Drosophila melanogaster CG10851-P...    30   3.7  
AE014297-1720|AAF54968.1|  329|Drosophila melanogaster CG10851-P...    30   3.7  
AE014297-1719|AAN13576.1|  346|Drosophila melanogaster CG10851-P...    30   3.7  
AE014297-1718|AAN13575.1|  350|Drosophila melanogaster CG10851-P...    30   3.7  
AE014297-1717|AAF54969.2|  350|Drosophila melanogaster CG10851-P...    30   3.7  

>X58720-1|CAA41556.1|  350|Drosophila melanogaster SRp55 protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 190 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 249

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 250 RSRSRSR 256


>BT004500-1|AAO42664.1|  216|Drosophila melanogaster GH08123p
           protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 56  GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 115

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 116 RSRSRSR 122


>BT003286-1|AAO25044.1|  350|Drosophila melanogaster GM10155p
           protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 190 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 249

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 250 RSRSRSR 256


>BT001750-1|AAN71505.1|  216|Drosophila melanogaster RH01580p
           protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 56  GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 115

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 116 RSRSRSR 122


>BT001495-1|AAN71250.1|  350|Drosophila melanogaster LD30815p
           protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 190 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 249

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 250 RSRSRSR 256


>BT001417-1|AAN71172.1|  216|Drosophila melanogaster GH12433p
           protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 56  GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 115

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 116 RSRSRSR 122


>AY113327-1|AAM29332.1|  350|Drosophila melanogaster AT29232p
           protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 190 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 249

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 250 RSRSRSR 256


>AY069302-1|AAL39447.1|  216|Drosophila melanogaster HL03687p
           protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 56  GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 115

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 116 RSRSRSR 122


>AE014297-1724|AAX52949.1|  216|Drosophila melanogaster CG10851-PH,
           isoform H protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 56  GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 115

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 116 RSRSRSR 122


>AE014297-1723|AAN13579.1|  216|Drosophila melanogaster CG10851-PG,
           isoform G protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 56  GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 115

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 116 RSRSRSR 122


>AE014297-1720|AAF54968.1|  329|Drosophila melanogaster CG10851-PB,
           isoform B protein.
          Length = 329

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 195 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 254

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 255 RSRSRSR 261


>AE014297-1719|AAN13576.1|  346|Drosophila melanogaster CG10851-PE,
           isoform E protein.
          Length = 346

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 186 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 245

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 246 RSRSRSR 252


>AE014297-1718|AAN13575.1|  350|Drosophila melanogaster CG10851-PC,
           isoform C protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 190 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 249

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 250 RSRSRSR 256


>AE014297-1717|AAF54969.2|  350|Drosophila melanogaster CG10851-PA,
           isoform A protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 468 GQRXGKGXLXXGRSSASXVXDSXXSXVRLRQPVSAHSKXVIRLSTKSGDNPGKNM*P-KG 644
           G+  G G    GRS +S       S  R R   S+HS+   R  +KS     K+  P K 
Sbjct: 190 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKS 249

Query: 645 HQRARNR 665
             R+R+R
Sbjct: 250 RSRSRSR 256


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,912,664
Number of Sequences: 53049
Number of extensions: 328169
Number of successful extensions: 508
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)