Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N01
         (1023 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1Z6P3 Cluster: CG3265-PC, isoform C; n=7; Diptera|Rep:...    57   6e-07
UniRef50_Q5LJZ0 Cluster: CG40354-PB.3; n=1; Drosophila melanogas...    52   2e-05
UniRef50_Q15555 Cluster: Microtubule-associated protein RP/EB fa...    48   4e-04
UniRef50_Q8UW78 Cluster: XEB1A; n=9; Coelomata|Rep: XEB1A - Xeno...    46   0.002
UniRef50_UPI000065FADA Cluster: Microtubule-associated protein R...    45   0.004
UniRef50_UPI00006A2870 Cluster: Microtubule-associated protein R...    40   0.078
UniRef50_Q8MY61 Cluster: Microtubule-associated protein EB1 homo...    40   0.14 
UniRef50_Q5DHX0 Cluster: SJCHGC06263 protein; n=1; Schistosoma j...    38   0.32 
UniRef50_O17509 Cluster: Putative homologue of human EB1; n=1; B...    37   0.96 
UniRef50_Q9GRZ1 Cluster: Putative uncharacterized protein ebp-1;...    35   2.9  
UniRef50_Q8IQA0 Cluster: CG32371-PA; n=2; Drosophila melanogaste...    35   3.9  
UniRef50_Q8T3Q9 Cluster: AT09431p; n=2; Drosophila melanogaster|...    34   6.8  

>UniRef50_A1Z6P3 Cluster: CG3265-PC, isoform C; n=7; Diptera|Rep:
           CG3265-PC, isoform C - Drosophila melanogaster (Fruit
           fly)
          Length = 393

 Score = 57.2 bits (132), Expect = 6e-07
 Identities = 38/87 (43%), Positives = 44/87 (50%)
 Frame = +3

Query: 252 MAVYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGAAX*QFMAPAVPWQCTXD 431
           MAV VYST     ++  R    AWVNDCLQS F+ IE LCTGAA  QFM    P      
Sbjct: 1   MAVNVYSTNVT-SENLSRHDMLAWVNDCLQSQFSKIEELCTGAAYCQFMDMLFPNSVPVK 59

Query: 432 KNXXXXXIWXXXIYXXSXIXEAGFKKM 512
           +      +    I     I +AGFKKM
Sbjct: 60  RVKFRTNLEHEYIQNFK-ILQAGFKKM 85



 Score = 34.3 bits (75), Expect = 5.1
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 403 LLXPGSVPXTRIXFXYXFGX*XYTXXRKYXKLVLKRWAVDXXLPIDKLVXGXF 561
           +L P SVP  R+ F        Y    K  +   K+ +VD  +P+DKL+ G F
Sbjct: 50  MLFPNSVPVKRVKFRTNLEH-EYIQNFKILQAGFKKMSVDKIIPVDKLIKGRF 101


>UniRef50_Q5LJZ0 Cluster: CG40354-PB.3; n=1; Drosophila
           melanogaster|Rep: CG40354-PB.3 - Drosophila melanogaster
           (Fruit fly)
          Length = 217

 Score = 52.4 bits (120), Expect = 2e-05
 Identities = 28/49 (57%), Positives = 32/49 (65%)
 Frame = +3

Query: 252 MAVYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGAAX*QFM 398
           MAV VYST     ++  R    AWVNDCLQS ++ IE LCTGAA  QFM
Sbjct: 1   MAVNVYSTNVT-SENLSRHDMLAWVNDCLQSQYSKIEELCTGAANCQFM 48


>UniRef50_Q15555 Cluster: Microtubule-associated protein RP/EB
           family member 2; n=27; Euteleostomi|Rep:
           Microtubule-associated protein RP/EB family member 2 -
           Homo sapiens (Human)
          Length = 327

 Score = 48.0 bits (109), Expect = 4e-04
 Identities = 32/93 (34%), Positives = 45/93 (48%)
 Frame = +3

Query: 234 RXYILXMAVYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGAAX*QFMAPAVP 413
           R Y   MAV VYST    +++  R    AWVND +  N+  +E LC+GAA  QFM    P
Sbjct: 38  RSYSWGMAVNVYSTSIT-QETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFP 96

Query: 414 WQCTXDKNXXXXXIWXXXIYXXSXIXEAGFKKM 512
              +  K      +    I+    + +A FK+M
Sbjct: 97  GCISLKKVKFQAKLEHEYIHNFK-LLQASFKRM 128


>UniRef50_Q8UW78 Cluster: XEB1A; n=9; Coelomata|Rep: XEB1A - Xenopus
           laevis (African clawed frog)
          Length = 295

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 31/88 (35%), Positives = 40/88 (45%)
 Frame = +3

Query: 252 MAVYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGAAX*QFMAPAVPWQCTXD 431
           MAV VYST      +  R    AW+N+ LQ N   IE LC+G+   QFM    P      
Sbjct: 1   MAVNVYSTSVT-SDNLSRHDMLAWINESLQLNLTKIEQLCSGSVYCQFMDMLFPGAVVLK 59

Query: 432 KNXXXXXIWXXXIYXXSXIXEAGFKKMG 515
           K      +    I+    + +A FKKMG
Sbjct: 60  KVKFQAKLEHEYIHNFK-LLQASFKKMG 86


>UniRef50_UPI000065FADA Cluster: Microtubule-associated protein
           RP/EB family member 1 (APC-binding protein EB1)
           (End-binding protein 1) (EB1).; n=13; Coelomata|Rep:
           Microtubule-associated protein RP/EB family member 1
           (APC-binding protein EB1) (End-binding protein 1) (EB1).
           - Takifugu rubripes
          Length = 287

 Score = 44.8 bits (101), Expect = 0.004
 Identities = 31/88 (35%), Positives = 37/88 (42%)
 Frame = +3

Query: 252 MAVYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGAAX*QFMAPAVPWQCTXD 431
           MAV VYST      +  R     W+N+ LQ N   IE LC+GAA  QFM    P  C   
Sbjct: 1   MAVNVYSTSVT-SDNLSRHDMLVWINESLQMNLTKIEMLCSGAAYCQFMDMLFP-NCVPL 58

Query: 432 KNXXXXXIWXXXIYXXSXIXEAGFKKMG 515
           K                 + +  FKKMG
Sbjct: 59  KKVKFGAKLEHEYIHNFKLLQVSFKKMG 86


>UniRef50_UPI00006A2870 Cluster: Microtubule-associated protein
           RP/EB family member 2 (APC-binding protein EB2)
           (End-binding protein 2) (EB2).; n=1; Xenopus
           tropicalis|Rep: Microtubule-associated protein RP/EB
           family member 2 (APC-binding protein EB2) (End-binding
           protein 2) (EB2). - Xenopus tropicalis
          Length = 233

 Score = 40.3 bits (90), Expect = 0.078
 Identities = 22/42 (52%), Positives = 25/42 (59%)
 Frame = +3

Query: 252 MAVYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTG 377
           MAV VYST     ++  R    AWVND LQ N+  IE LCTG
Sbjct: 1   MAVNVYSTSVT-SENLSRHDMLAWVNDSLQLNYTKIEQLCTG 41


>UniRef50_Q8MY61 Cluster: Microtubule-associated protein EB1
           homologue; n=1; Ciona savignyi|Rep:
           Microtubule-associated protein EB1 homologue - Ciona
           savignyi (Pacific transparent sea squirt)
          Length = 300

 Score = 39.5 bits (88), Expect = 0.14
 Identities = 22/48 (45%), Positives = 27/48 (56%)
 Frame = +3

Query: 255 AVYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGAAX*QFM 398
           AV V+ST      +  R    +WVND L+ N + IE LCTGA   QFM
Sbjct: 3   AVNVFSTSMT-SANPSRQDLVSWVNDSLELNISKIEHLCTGAVYCQFM 49


>UniRef50_Q5DHX0 Cluster: SJCHGC06263 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06263 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 239

 Score = 38.3 bits (85), Expect = 0.32
 Identities = 30/108 (27%), Positives = 47/108 (43%)
 Frame = +3

Query: 246 LXMAVYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGAAX*QFMAPAVPWQCT 425
           +  AV V+ST + +  +  R     WVN CL S ++ +E LCTGAA  Q +    P    
Sbjct: 4   IPQAVNVHSTSQ-MTDNLSRNDILQWVNHCLDSCYSKVEELCTGAAYCQLVDMLFPGTLV 62

Query: 426 XDKNXXXXXIWXXXIYXXSXIXEAGFKKMGGGRDXXH*QTGEXSFSNN 569
             K      +    I     + +A FKK G  ++    +  +  F +N
Sbjct: 63  FKKVKFNTKLEHEYINNFK-VLQALFKKHGVDKEVPIEKLVKGKFQDN 109


>UniRef50_O17509 Cluster: Putative homologue of human EB1; n=1;
           Botryllus schlosseri|Rep: Putative homologue of human
           EB1 - Botryllus schlosseri (Star ascidian)
          Length = 287

 Score = 36.7 bits (81), Expect = 0.96
 Identities = 21/49 (42%), Positives = 25/49 (51%)
 Frame = +3

Query: 252 MAVYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGAAX*QFM 398
           MAV VYST     ++  R     WVN  L  N   +E LC+GA   QFM
Sbjct: 1   MAVNVYSTSVTT-ENLSRHDLLGWVNRSLDLNLTKVEQLCSGAVYCQFM 48


>UniRef50_Q9GRZ1 Cluster: Putative uncharacterized protein ebp-1;
           n=3; Caenorhabditis|Rep: Putative uncharacterized
           protein ebp-1 - Caenorhabditis elegans
          Length = 316

 Score = 35.1 bits (77), Expect = 2.9
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = +3

Query: 258 VYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGA 380
           V VY+T  +   +  R     WVNDCLQ++F  IE L TGA
Sbjct: 6   VNVYTTASSA-DNLSRHEMLMWVNDCLQAHFTKIEQLHTGA 45


>UniRef50_Q8IQA0 Cluster: CG32371-PA; n=2; Drosophila
           melanogaster|Rep: CG32371-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 294

 Score = 34.7 bits (76), Expect = 3.9
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 318 AWVNDCLQSNFANIE*LCTGAAX*QFM 398
           +WVN+ L+S F  +E LCTGAA  Q M
Sbjct: 29  SWVNNTLKSQFFKVEELCTGAAYCQLM 55


>UniRef50_Q8T3Q9 Cluster: AT09431p; n=2; Drosophila
           melanogaster|Rep: AT09431p - Drosophila melanogaster
           (Fruit fly)
          Length = 362

 Score = 33.9 bits (74), Expect = 6.8
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +3

Query: 321 WVNDCLQSNFANIE*LCTGAAX*QFMAPAVP 413
           W N+ LQ N  NIE LCTGAA    M    P
Sbjct: 27  WFNETLQCNLINIEQLCTGAAYCNLMHMLYP 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,149,089
Number of Sequences: 1657284
Number of extensions: 6343154
Number of successful extensions: 7505
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7501
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 97572067153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)