Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_N01
         (1023 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    35   0.081
AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical ...    29   5.3  

>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 35.1 bits (77), Expect = 0.081
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = +3

Query: 258 VYVYSTKRNVRKSXXRXICYAWVNDCLQSNFANIE*LCTGA 380
           V VY+T  +   +  R     WVNDCLQ++F  IE L TGA
Sbjct: 6   VNVYTTASSA-DNLSRHEMLMWVNDCLQAHFTKIEQLHTGA 45


>AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical
           protein VW02B12L.3 protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 318 AWVNDCLQSNFANIE*LCTGAA 383
           AWVN+ L+S+F  +E + +GAA
Sbjct: 22  AWVNNLLKSHFTKVEEMASGAA 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,943,209
Number of Sequences: 27780
Number of extensions: 152791
Number of successful extensions: 162
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2699257404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)