Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_M24
(901 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 146 5e-34
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 121 2e-26
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 9e-18
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 57 7e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 56 1e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.049
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 38 0.35
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.46
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 35 3.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 34 5.7
UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: Co... 33 9.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 146 bits (355), Expect = 5e-34
Identities = 78/126 (61%), Positives = 80/126 (63%)
Frame = +2
Query: 488 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPXEAPSCALLFRP 667
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP EAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 668 XPLTGYLSAFLPSGSVALXIXHAVGISXRCRSXXPXWAVXTNPPFXPDRXXXSGXIXLXX 847
L F + I HAVGIS RCRS P WAV TNPPF P I L
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 848 TRXXPT 865
TR T
Sbjct: 122 TRKDTT 127
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 121 bits (292), Expect = 2e-26
Identities = 71/119 (59%), Positives = 76/119 (63%)
Frame = +2
Query: 320 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 499
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 500 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPXEAPSCALLFRPXPL 676
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFP APSCALLF P L
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGL 132
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 93.1 bits (221), Expect = 9e-18
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +2
Query: 506 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPXEAPSCALLFRP 667
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFP APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 496 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 383
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 296 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 463
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 56.8 bits (131), Expect = 7e-07
Identities = 36/91 (39%), Positives = 39/91 (42%)
Frame = +2
Query: 581 VRGGETRQDYKDTRRFPXEAPSCALLFRPXPLTGYLSAFLPSGSVALXIXHAVGISXRCR 760
VR GETRQD K P P + F +GSVAL GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 761 SXXPXWAVXTNPPFXPDRXXXSGXIXLXXTR 853
S P WAV NPPF P + L TR
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTR 113
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -1
Query: 859 VXPGXXQXDXTGXGXXVGXERGVXXHSPXWXXRPTPX*DTYSVXYXKR-HASRREKGGQV 683
V PG Q D G ERGV +SP W RP P DT SV Y K + +K QV
Sbjct: 6 VRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV 65
Query: 682 SGKRXGSEQESARGSFXGETP 620
SGKR G + + G+ ++P
Sbjct: 66 SGKRQGRNRRAHEGAAGEKSP 86
Score = 41.9 bits (94), Expect = 0.021
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -2
Query: 708 PEGRKADRYPVSGXGRNRRAHEGASXGKRLVSL*SCRVSPPLT 580
P+G+KA++ GRNRRAHEGA+ K SL PPLT
Sbjct: 57 PKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 56.0 bits (129), Expect = 1e-06
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +2
Query: 395 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 568
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 569 IDAQVRGGETRQDYKDTRRFPXEAPSCALLFRP 667
I Q + +T+ +YK T FP ++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 415 HSKAVIRLSTESGDNAGKNM 474
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.049
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 294 SALMNRPTRGERRFAYW 344
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 366 ERGSGRAPNTQTASPRALADSLMQ 295
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 37.9 bits (84), Expect = 0.35
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 671 PLTGYLSAFLPSGSVAL 721
PLTGYLSAFLPSGSVAL
Sbjct: 9 PLTGYLSAFLPSGSVAL 25
Score = 34.7 bits (76), Expect = 3.3
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +1
Query: 646 VRSPVPTXAAYRIPVRLSPFGKRGASHXSRCRYLXSV 756
+RSPVPT P G SH SRCRYL SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 108 MIRYIDEFGQTTTRMQ 155
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 34.7 bits (76), Expect = 3.3
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -1
Query: 688 QVSGKRXGSEQESARGSFXGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPF 509
++ G GS+Q S+ G++P + GFA+ + +F +A GG + +P + P
Sbjct: 575 RLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPS 634
Query: 508 YGSWP 494
Y S P
Sbjct: 635 YLSVP 639
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 505 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 383
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 177 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 344
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 257 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 93
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 853 PGXXQXDXTGXGXXVGXERGVXXHSPXWXXRPTP 752
PG Q D ERGV HSP W RPTP
Sbjct: 8 PGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: CobN
- Silicibacter pomeroyi
Length = 1097
Score = 33.1 bits (72), Expect = 9.9
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 658 QESARGSFXGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 515
+E+ + G++P +VLS F+ SDL +GGGA GK P R
Sbjct: 12 EETETPTDLGQSPADLVVLS-FSDSDLGAFAAGWHRGGGAVGKLPTLR 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,908,231
Number of Sequences: 1657284
Number of extensions: 14409441
Number of successful extensions: 36058
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 34595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36036
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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