Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M19
         (868 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC049220-1|AAH49220.1|  428|Homo sapiens SLC9A3R1 protein protein.     31   4.1  
AK054768-1|BAB70804.1|  168|Homo sapiens protein ( Homo sapiens ...    31   7.2  

>BC049220-1|AAH49220.1|  428|Homo sapiens SLC9A3R1 protein protein.
          Length = 428

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +2

Query: 59  GQRSGTVPGXPACNATAPTCGWGRVGPVRRPAASSDVARPL 181
           G R  TVPG PAC A     G+    PVR     +  +RP+
Sbjct: 15  GSRRPTVPGTPACLARPAAQGFSAALPVRWTGRRAGPSRPV 55


>AK054768-1|BAB70804.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30206 fis, clone BRACE2001508, weakly similar to
           PROTEIN-LYSINE 6-OXIDASE PRECURSOR (EC 1.4.3.13). ).
          Length = 168

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 23/64 (35%), Positives = 27/64 (42%)
 Frame = +2

Query: 41  LRLLALGQRSGTVPGXPACNATAPTCGWGRVGPVRRPAASSDVARPLDWPRY*RDSPRRL 220
           L+LL+  +R     G P     A    W R GP RRP  S  + R   WP   R  P   
Sbjct: 43  LQLLSADRRPLRRTGAPPAQGPAQH-PWSR-GPPRRPPRSVKLCRAQQWPET-RADPLPA 99

Query: 221 ATRQ 232
            TRQ
Sbjct: 100 GTRQ 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,275,711
Number of Sequences: 237096
Number of extensions: 1942120
Number of successful extensions: 8425
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8423
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)